CTELS:一种用于分析翻译终止速率的无细胞系统。
CTELS: A Cell-Free System for the Analysis of Translation Termination Rate.
机构信息
Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119234 Moscow, Russia.
Department of Molecular Biology, Biological Faculty, Lomonosov Moscow State University, 119991 Moscow, Russia.
出版信息
Biomolecules. 2020 Jun 16;10(6):911. doi: 10.3390/biom10060911.
Translation termination is the final step in protein biosynthesis when the synthesized polypeptide is released from the ribosome. Understanding this complex process is important for treatment of many human disorders caused by nonsense mutations in important genes. Here, we present a new method for the analysis of translation termination rate in cell-free systems, CTELS (for C-terminally extended luciferase-based system). This approach was based on a continuously measured luciferase activity during in vitro translation reaction of two reporter mRNA, one of which encodes a C-terminally extended luciferase. This extension occupies a ribosomal polypeptide tunnel and lets the completely synthesized enzyme be active before translation termination occurs, i.e., when it is still on the ribosome. In contrast, luciferase molecule without the extension emits light only after its release. Comparing the translation dynamics of these two reporters allows visualization of a delay corresponding to the translation termination event. We demonstrated applicability of this approach for investigating the effects of cis- and trans-acting components, including small molecule inhibitors and read-through inducing sequences, on the translation termination rate. With CTELS, we systematically assessed negative effects of decreased 3' UTR length, specifically on termination. We also showed that blasticidin S implements its inhibitory effect on eukaryotic translation system, mostly by affecting elongation, and that an excess of eRF1 termination factor (both the wild-type and a non-catalytic AGQ mutant) can interfere with elongation. Analysis of read-through mechanics with CTELS revealed a transient stalling event at a "leaky" stop codon context, which likely defines the basis of nonsense suppression.
翻译终止是蛋白质生物合成的最后一步,此时合成的多肽从核糖体中释放出来。了解这个复杂的过程对于治疗许多由重要基因中的无意义突变引起的人类疾病非常重要。在这里,我们提出了一种新的分析无细胞系统中翻译终止率的方法,即 CTELS(基于 C 端延伸荧光素酶的系统)。该方法基于体外翻译反应过程中连续测量的荧光素酶活性,该反应使用两种报告 mRNA 进行,其中一种编码 C 端延伸的荧光素酶。这种延伸占据核糖体多肽隧道,使完全合成的酶在翻译终止发生之前(即在它仍然在核糖体上时)具有活性。相比之下,没有延伸的荧光素酶分子只有在释放后才会发光。比较这两种报告分子的翻译动力学,可以可视化与翻译终止事件相对应的延迟。我们证明了这种方法在研究顺式和反式作用成分(包括小分子抑制剂和通读诱导序列)对翻译终止率的影响方面的适用性。使用 CTELS,我们系统地评估了 3'UTR 长度减少对终止的负面影响。我们还表明,博来霉素 S 通过影响延伸来实现其对真核翻译系统的抑制作用,并且终止因子 eRF1 的过量(野生型和非催化 AGQ 突变体)会干扰延伸。使用 CTELS 分析通读机制表明,在“渗漏”终止密码子环境下会发生短暂的停滞事件,这可能定义了无义抑制的基础。