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基于深度学习的合成偏振敏感光学相干断层扫描技术

Synthetic polarization-sensitive optical coherence tomography by deep learning.

作者信息

Sun Yi, Wang Jianfeng, Shi Jindou, Boppart Stephen A

机构信息

Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.

Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA.

出版信息

NPJ Digit Med. 2021 Jul 1;4(1):105. doi: 10.1038/s41746-021-00475-8.

DOI:10.1038/s41746-021-00475-8
PMID:34211104
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8249385/
Abstract

Polarization-sensitive optical coherence tomography (PS-OCT) is a high-resolution label-free optical biomedical imaging modality that is sensitive to the microstructural architecture in tissue that gives rise to form birefringence, such as collagen or muscle fibers. To enable polarization sensitivity in an OCT system, however, requires additional hardware and complexity. We developed a deep-learning method to synthesize PS-OCT images by training a generative adversarial network (GAN) on OCT intensity and PS-OCT images. The synthesis accuracy was first evaluated by the structural similarity index (SSIM) between the synthetic and real PS-OCT images. Furthermore, the effectiveness of the computational PS-OCT images was validated by separately training two image classifiers using the real and synthetic PS-OCT images for cancer/normal classification. The similar classification results of the two trained classifiers demonstrate that the predicted PS-OCT images can be potentially used interchangeably in cancer diagnosis applications. In addition, we applied the trained GAN models on OCT images collected from a separate OCT imaging system, and the synthetic PS-OCT images correlate well with the real PS-OCT image collected from the same sample sites using the PS-OCT imaging system. This computational PS-OCT imaging method has the potential to reduce the cost, complexity, and need for hardware-based PS-OCT imaging systems.

摘要

偏振敏感光学相干断层扫描(PS-OCT)是一种高分辨率的无标记光学生物医学成像模态,它对组织中产生形态双折射的微观结构敏感,如胶原蛋白或肌肉纤维。然而,要在光学相干断层扫描(OCT)系统中实现偏振敏感性,需要额外的硬件且会增加复杂性。我们开发了一种深度学习方法,通过在OCT强度图像和PS-OCT图像上训练生成对抗网络(GAN)来合成PS-OCT图像。首先通过合成的PS-OCT图像与真实PS-OCT图像之间的结构相似性指数(SSIM)来评估合成精度。此外,通过分别使用真实和合成的PS-OCT图像训练两个图像分类器进行癌症/正常分类,验证了计算得到的PS-OCT图像的有效性。两个训练好的分类器的相似分类结果表明,预测的PS-OCT图像在癌症诊断应用中可能具有可互换使用的潜力。此外,我们将训练好的GAN模型应用于从单独的OCT成像系统收集的OCT图像上,合成的PS-OCT图像与使用PS-OCT成像系统从相同样本部位收集的真实PS-OCT图像具有良好的相关性。这种计算PS-OCT成像方法有潜力降低基于硬件的PS-OCT成像系统的成本、复杂性和需求。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/9f52ca50df63/41746_2021_475_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/5aa9a3c3d14b/41746_2021_475_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/198fe2fd0c71/41746_2021_475_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/c50c28555245/41746_2021_475_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/ca65d0912b50/41746_2021_475_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/9f52ca50df63/41746_2021_475_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/5aa9a3c3d14b/41746_2021_475_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/198fe2fd0c71/41746_2021_475_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/c50c28555245/41746_2021_475_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/ca65d0912b50/41746_2021_475_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16bd/8249385/9f52ca50df63/41746_2021_475_Fig5_HTML.jpg

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