Kang Mingyeong, Park Woojun
Laboratory of Molecular Environmental Microbiology, Department of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea.
Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004845.
A novel bacterial strain, named HC41, was isolated from a cyanobacterial bloom sample and was characterized as Gram-stain-negative, rod-shaped and non-motile. According to 16S rRNA phylogenetic analyses, this strain HC41 belongs to the family and is most closely related to KACC 17062 (=MIC 2059; 98.63 %) and 5YN10-9 (=KACC 11603; 93.64 %). The genome size and DNA G+C content of strain HC41 were 4.8 Mbp and 64.17 mol%, respectively. Moreover, the average nucleotide identity, digital DNA-DNA hybridization and amino acid identity values between strain HC41 and KACC 17062 were 81.8, 43.1 and 90.89 %, respectively. Additionally, strain HC41 exhibited weak catalase and oxidase activities and had no motility (swimming and swarming motilities). The cells grew at 11-40 °C (optimum, 30 °C), pH 5.5-8.0 (optimum, pH 7) and with 0-1.0 % (w/v) NaCl (optimum, 0 % NaCl) in Reasoner's 2A medium. Its major respiratory quinone was ubiquinone-8 and its major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. Furthermore, C and summed feature 3 (C ω7 and/or C ω6c; C ω6 and/or C ω7) were the predominant cellular fatty acids in strain HC41 according to fatty acid methyl ester analysis. Based on its genotypic and phenotypic characteristics, strain HC41 was identified as representing a novel species, for which the name sp. nov. is proposed (=KACC 22091=DSM 111425).
从蓝藻水华样本中分离出一种名为HC41的新型细菌菌株,其特征为革兰氏染色阴性、杆状且无运动性。根据16S rRNA系统发育分析,该菌株HC41属于[具体科名未给出]科,与KACC 17062(=MIC 2059;98.63%)和5YN10 - 9(=KACC 11603;93.64%)关系最为密切。菌株HC41的基因组大小和DNA G + C含量分别为4.8 Mbp和64.17 mol%。此外,菌株HC41与KACC 17062之间的平均核苷酸同一性、数字DNA - DNA杂交和氨基酸同一性值分别为81.8%、43.1%和90.89%。另外,菌株HC41表现出较弱的过氧化氢酶和氧化酶活性,并且没有运动性(游泳和群游运动)。细胞在Reasoner's 2A培养基中于11 - 40°C(最适温度30°C)、pH 5.5 - 8.0(最适pH 7)以及0 - 1.0%(w/v)NaCl(最适0% NaCl)条件下生长。其主要呼吸醌为泛醌 - 8,主要极性脂为双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺。此外,根据脂肪酸甲酯分析,C和总和特征3(C ω7和/或C ω6c;C ω6和/或C ω7)是菌株HC41中的主要细胞脂肪酸。基于其基因型和表型特征,菌株HC41被鉴定为代表一个新的[属名未给出]物种,为此提出新物种名称[属名] sp. nov.(=KACC 22091 = DSM 111425)。