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新种嗜泥寡养单胞菌,从淡水沉积物中分离得到。

Uliginosibacterium sediminicola sp. nov., isolated from freshwater sediment.

作者信息

Hwang Woon Mo, Kim Su Min, Kang Keunsoo, Ahn Tae-Young

机构信息

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2018 Mar;68(3):924-929. doi: 10.1099/ijsem.0.002611. Epub 2018 Jan 30.

Abstract

Strain M1-21 is a Gram-stain-negative, strictly aerobic and short-rod-shaped bacterium, motile by means of a single polar flagellum; it was isolated from freshwater sediment in Korea. It grew at 10-40 °C (optimum 25 °C), pH 6.0-8.0 (optimum pH 7.0) and with 0-0.75 % (w/v) NaCl (optimal growth occurred in the absence of NaCl) on R2A agar, and it accumulated poly-β-hydroxybutyrate granules inside the cells. According to 16S rRNA gene sequence analysis, strain M1-21 showed highest sequence similarity with Uliginosibacterium gangwonense (94.7 %) and Uliginosibacterium paludis (94.4 %). Phylogenetic analysis of the 16S rRNA gene sequences revealed that strain M1-21 belongs to the genus Uliginosibacterium. The DNA G+C content of strain M1-21 was 61.9 mol%. The predominant respiratory quinone was ubiquinone-8. The major fatty acids (>10 % of the total) were C16 : 0 and summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), and the major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. Strain M1-21 showed distinct phenotypic characteristics that differentiated it from species of the genus Uliginosibacterium. Based on these results, strain M1-21 represents a novel species of the genus Uliginosibacterium, for which the name Uliginosibacterium sediminicola sp. nov. is proposed. The type strain is M1-21 (=KACC 19271=JCM 32000).

摘要

菌株M1-21是革兰氏染色阴性、严格需氧的短杆状细菌,通过单根极生鞭毛运动;它是从韩国的淡水沉积物中分离出来的。该菌在R2A琼脂上于10-40 °C(最适温度25 °C)、pH 6.0-8.0(最适pH 7.0)以及含0-0.75 %(w/v)NaCl(无NaCl时生长最佳)的条件下生长,并且在细胞内积累聚-β-羟基丁酸酯颗粒。根据16S rRNA基因序列分析,菌株M1-21与江原寡养杆菌(94.7 %)和沼泽寡养杆菌(94.4 %)显示出最高的序列相似性。16S rRNA基因序列的系统发育分析表明,菌株M1-21属于寡养杆菌属。菌株M1-21的DNA G+C含量为61.9 mol%。主要呼吸醌为泛醌-8。主要脂肪酸(占总量的>10 %)为C16 : 0和总和特征3(C16 : 1ω6c和/或C16 : 1ω7c),主要极性脂为双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺。菌株M1-21表现出与寡养杆菌属其他种不同的表型特征。基于这些结果,菌株M1-21代表寡养杆菌属的一个新种,为此提出名为沉积物寡养杆菌(Uliginosibacterium sediminicola sp. nov.)的新名称。模式菌株为M1-21(=KACC 19271=JCM 32000)。

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