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必需的交叉喂养扩大了细菌的代谢生态位。

Obligate cross-feeding expands the metabolic niche of bacteria.

机构信息

Department of Ecology, School of Biology/Chemistry, Osnabrück University, Osnabrück, Germany.

Experimental Ecology and Evolution Research Group, Department of Bioorganic Chemistry, Max Planck Institute for Chemical Ecology, Jena, Germany.

出版信息

Nat Ecol Evol. 2021 Sep;5(9):1224-1232. doi: 10.1038/s41559-021-01505-0. Epub 2021 Jul 15.

Abstract

Bacteria frequently engage in obligate metabolic mutualisms with other microorganisms. However, it remains generally unclear how the resulting metabolic dependencies affect the ecological niche space accessible to the whole consortium relative to the niche space available to its constituent individuals. Here we address this issue by systematically cultivating metabolically dependent strains of different bacterial species either individually or as pairwise cocultures in a wide range of carbon sources. Our results show that obligate cross-feeding is significantly more likely to expand the metabolic niche space of interacting bacterial populations than to contract it. Moreover, niche expansion occurred predominantly between two specialist taxa and correlated positively with the phylogenetic distance between interaction partners. Together, our results demonstrate that obligate cross-feeding can significantly expand the ecological niche space of interacting bacterial genotypes, thus explaining the widespread occurrence of this type of ecological interaction in natural microbiomes.

摘要

细菌经常与其他微生物进行必需的代谢共生关系。然而,对于由此产生的代谢依赖性如何影响整个联合体相对于其组成个体可用的生态位空间的问题,目前仍普遍不清楚。在这里,我们通过在广泛的碳源中系统地培养不同细菌物种的代谢依赖性菌株,要么单独培养,要么作为成对的共培养物,来解决这个问题。我们的结果表明,强制性的交叉喂养更有可能扩大相互作用的细菌种群的代谢生态位空间,而不是缩小它。此外,小生境的扩展主要发生在两个专业分类群之间,并且与相互作用伙伴之间的系统发育距离呈正相关。总之,我们的结果表明,强制性的交叉喂养可以显著扩大相互作用的细菌基因型的生态位空间,从而解释了这种生态相互作用在自然微生物组中广泛存在的原因。

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