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鉴定和验证 EPHX2 作为肝细胞癌的预后生物标志物。

Identification and validation of EPHX2 as a prognostic biomarker in hepatocellular carcinoma.

机构信息

Department of Gastroenterology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing 400010, P.R. China.

Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing 400010, P.R. China.

出版信息

Mol Med Rep. 2021 Sep;24(3). doi: 10.3892/mmr.2021.12289. Epub 2021 Jul 19.

Abstract

Hepatocellular carcinoma (HCC) is one of the most common types of cancer, which is associated with a poor prognosis. It is necessary to identify novel prognostic biomarkers and therapeutic targets to improve the survival of patients with HCC. In the present study, a seven‑gene signature associated with HCC progression was identified using weighted gene co‑expression network analysis and least absolute shrinkage and selection operator, and its prognostic prediction value was confirmed in The Cancer Genome Atlas‑liver HCC and International Cancer Genome Consortium liver cancer‑RIKEN, Japan cohorts. Subsequently, a rarely reported gene, epoxide hydrolase 2 (EPHX2), was selected for further validation. Downregulation of EPHX2 in HCC was revealed using multiple expression datasets. Furthermore, reduced expression of EPHX2 was confirmed in HCC tissue samples and cell lines using reverse transcription‑quantitative polymerase chain reaction and western blotting. Additionally, Kaplan‑Meier survival curves indicated that patients with higher EPHX2 expression exhibited better prognosis, and clinicopathological analysis also revealed elevated EPHX2 levels in patients with early‑stage HCC. Notably, EPHX2 was identified as an independent prognostic biomarker for overall survival of patients with HCC. Gene Ontology analysis, Kyoto Encyclopedia of Genes and Genomes analysis and gene set enrichment analysis were performed to elucidate the functions of EPHX2. The results suggested that EPHX2 expression was closely associated with metabolic reprogramming. Finally, the prognostic value of EPHX2 was evaluated using HCC tissue microarrays. In conclusion, downregulation of EPHX2 was significantly associated with the development of HCC; therefore, EPHX2 may be considered a putative therapeutic candidate for the targeted treatment of HCC.

摘要

肝细胞癌(HCC)是最常见的癌症类型之一,其预后较差。有必要鉴定新的预后生物标志物和治疗靶点,以提高 HCC 患者的生存率。在本研究中,通过加权基因共表达网络分析和最小绝对收缩和选择算子(least absolute shrinkage and selection operator,LASSO),鉴定出与 HCC 进展相关的七个基因特征,并在癌症基因组图谱-肝癌(The Cancer Genome Atlas-liver HCC)和国际癌症基因组联合会肝癌-日本理化学研究所(International Cancer Genome Consortium liver cancer-RIKEN)队列中证实了其预后预测价值。随后,选择了一个很少报道的基因,即环氧化物水解酶 2(epoxide hydrolase 2,EPHX2)进行进一步验证。使用多个表达数据集揭示了 EPHX2 在 HCC 中的下调。此外,通过逆转录-定量聚合酶链反应和蛋白质印迹法在 HCC 组织样本和细胞系中证实了 EPHX2 的表达降低。此外,Kaplan-Meier 生存曲线表明,EPHX2 表达较高的患者预后较好,临床病理分析还显示早期 HCC 患者的 EPHX2 水平升高。值得注意的是,EPHX2 被鉴定为 HCC 患者总生存的独立预后生物标志物。进行了基因本体论分析、京都基因与基因组百科全书分析和基因集富集分析,以阐明 EPHX2 的功能。结果表明,EPHX2 的表达与代谢重编程密切相关。最后,使用 HCC 组织微阵列评估了 EPHX2 的预后价值。总之,EPHX2 的下调与 HCC 的发生显著相关;因此,EPHX2 可能被认为是 HCC 靶向治疗的潜在治疗候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d1d9/8299194/0009d215fd2d/mmr-24-03-12289-g00.jpg

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