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从锥虫类寄生虫中分离和研究外囊泡 DNA 的方法。

Methods for the Isolation and Study of Exovesicle DNA from Trypanosomatid Parasites.

机构信息

Programa de Estudio y Control de Enfermedades Tropicales (PECET), Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia.

Institute of Biotechnology, University of Granada, Granada, Spain.

出版信息

Methods Mol Biol. 2021;2369:301-317. doi: 10.1007/978-1-0716-1681-9_16.

DOI:10.1007/978-1-0716-1681-9_16
PMID:34313995
Abstract

Extracellular vesicles (EVs) or exovesicles are a heterogeneous group of small cell-derived membranous structures that carry complex cargoes including lipids, proteins, RNA, and DNA. Emerging evidence suggest that EVs secreted by kinetoplastid parasites play a cardinal role in the pathogenesis of diseases they cause, becoming valuable structures for understanding parasite-host interactions. Moreover, the characterization of EVs molecular cargo may provide a new approach to develop alternative tools for diagnosis and therapy of infectious diseases. EVs have a potential use as biomarkers since it contains a repertoire of DNA species that could be detected at different stages of infection by PCR-based assays. Here, we provide a detailed protocol for the isolation of Trypanosoma cruzi-derived EVs and purification of its DNA cargo for subsequent characterization. The methods described here are transferrable to other medically important parasites that are well adapted to grow in vitro and, therefore, suitable volume of EVs-containing supernatants can be obtained.

摘要

细胞外囊泡(EVs)或外囊泡是一组异质性的小细胞衍生的膜结构,携带复杂的货物,包括脂质、蛋白质、RNA 和 DNA。新出现的证据表明,动基体寄生虫分泌的 EVs 在它们引起的疾病发病机制中起着至关重要的作用,成为了解寄生虫-宿主相互作用的有价值的结构。此外,EVs 分子货物的特征分析可能为开发用于诊断和治疗传染病的替代工具提供一种新方法。EVs 具有作为生物标志物的潜力,因为它包含一组 DNA 物种,这些物种可以通过基于 PCR 的检测在感染的不同阶段被检测到。在这里,我们提供了一种从克氏锥虫衍生的 EVs 中分离和纯化其 DNA 货物的详细方案,用于后续的特征分析。这里描述的方法可以转移到其他在体外生长良好的医学上重要的寄生虫上,因此可以获得含有 EVs 的上清液的合适体积。

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Use of sera cell free DNA (cfDNA) and exovesicle-DNA for the molecular diagnosis of chronic Chagas disease.应用血清无细胞 DNA(cfDNA)和外泌体-DNA 进行慢性恰加斯病的分子诊断。
PLoS One. 2023 Sep 8;18(9):e0282814. doi: 10.1371/journal.pone.0282814. eCollection 2023.

本文引用的文献

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-infected macrophages release extracellular vesicles that can promote lesion development.被感染的巨噬细胞释放出的细胞外囊泡可以促进病变发展。
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Membrane-bound extracellular vesicles secreted by parasitic protozoa: cellular structures involved in the communication between cells.由寄生原生动物分泌的膜结合细胞外囊泡:参与细胞间通讯的细胞结构。
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Extracellular Vesicles Shed By Potentiate Infection and Elicit Lipid Body Formation and PGE Production in Murine Macrophages.
外泌体由增强感染并在小鼠巨噬细胞中引发脂滴形成和 PGE 产生。
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Extracellular Vesicles from Trypanosoma brucei Mediate Virulence Factor Transfer and Cause Host Anemia.布氏锥虫的细胞外囊泡介导毒力因子转移并导致宿主贫血。
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Exosomes and Other Extracellular Vesicles: The New Communicators in Parasite Infections.外泌体和其他细胞外囊泡:寄生虫感染中的新型通讯介质
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Profiling of small RNA cargo of extracellular vesicles shed by Trypanosoma cruzi reveals a specific extracellular signature.克氏锥虫释放的细胞外囊泡中小RNA货物的分析揭示了一种特定的细胞外特征。
Mol Biochem Parasitol. 2015 Jan-Feb;199(1-2):19-28. doi: 10.1016/j.molbiopara.2015.03.003. Epub 2015 Mar 17.
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Extracellular vesicles in parasitic diseases.寄生虫病中的细胞外囊泡。
J Extracell Vesicles. 2014 Dec 22;3:25040. doi: 10.3402/jev.v3.25040. eCollection 2014.
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