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What we know and what we need to know about the origin of SARS-CoV-2.关于 SARS-CoV-2 的起源,我们已知和未知的情况。
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An updated review of the scientific literature on the origin of SARS-CoV-2.关于 SARS-CoV-2 起源的科学文献的最新综述。
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Molecular evolution and phylogenetic analysis of SARS-CoV-2 and hosts ACE2 protein suggest Malayan pangolin as intermediary host.SARS-CoV-2 与宿主 ACE2 蛋白的分子进化和系统发育分析提示马来穿山甲可能为中间宿主。
Braz J Microbiol. 2020 Dec;51(4):1593-1599. doi: 10.1007/s42770-020-00321-1. Epub 2020 Jun 26.
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Where Did SARS-CoV-2 Come From?SARS-CoV-2 从何而来?
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Use of a risk assessment tool to determine the origin of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2).使用风险评估工具确定严重急性呼吸综合征冠状病毒 2 (SARS-CoV-2) 的起源。
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Natural selection versus creation: a review on the origin of SARS-COV-2.自然选择与神创论:关于新冠病毒起源的综述
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Appearance and re-appearance of zoonotic disease during the pandemic period: long-term monitoring and analysis of zoonosis is crucial to confirm the animal origin of SARS-CoV-2 and monkeypox virus.大流行期间人畜共患病的出现与再现:对人畜共患病进行长期监测和分析对于确认SARS-CoV-2和猴痘病毒的动物起源至关重要。
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The novel zoonotic COVID-19 pandemic: An expected global health concern.新型人畜共患的新冠疫情:一个意料之中的全球卫生问题。
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[Source of the COVID-19 pandemic: ecology and genetics of coronaviruses (Betacoronavirus: Coronaviridae) SARS-CoV, SARS-CoV-2 (subgenus Sarbecovirus), and MERS-CoV (subgenus Merbecovirus).].[新冠疫情的源头:冠状病毒(β冠状病毒:冠状病毒科)、严重急性呼吸综合征冠状病毒(SARS-CoV)、严重急性呼吸综合征冠状病毒2(SARS-CoV-2,Sarbecovirus亚属)和中东呼吸综合征冠状病毒(MERS-CoV,Merbecovirus亚属)的生态学与遗传学。]
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Publishing in pandemic times: A bibliometric analysis of early medical publications on Kawasaki-like disease (MIS-C, PIMS-TS) related to SARS-CoV-2.大流行时期的出版:与 SARS-CoV-2 相关的川崎病样疾病(MIS-C、PIMS-TS)早期医学出版物的文献计量分析。
Arch Pediatr. 2021 Aug;28(6):464-469. doi: 10.1016/j.arcped.2021.05.002. Epub 2021 May 28.

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Preventing zoonotic spillover through regulatory frameworks governing wildlife trade: A scoping review.通过管理野生动物贸易的监管框架预防人畜共患病传播:一项范围综述
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Elucidating the role of environmental management of forests, air quality, solid waste and wastewater on the dissemination of SARS-CoV-2.阐明森林环境管理、空气质量、固体废物和废水管理对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)传播的作用。
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The concentrations of essential/toxic elements in serum of COVID-19 patients are not directly related to the severity of the disease.COVID-19 患者血清中的必需/有毒元素浓度与疾病严重程度没有直接关系。
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Updated analysis to reject the laboratory-engineering hypothesis of SARS-CoV-2.更新分析以否定 SARS-CoV-2 的实验室工程假设。
Environ Res. 2023 May 1;224:115481. doi: 10.1016/j.envres.2023.115481. Epub 2023 Feb 18.
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RADIC:A tool for diagnosing COVID-19 from chest CT and X-ray scans using deep learning and quad-radiomics.RADIC:一种利用深度学习和四元放射组学从胸部CT和X光扫描诊断新冠肺炎的工具。
Chemometr Intell Lab Syst. 2023 Feb 15;233:104750. doi: 10.1016/j.chemolab.2022.104750. Epub 2023 Jan 2.
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SARS-CoV-2 Variants of Concern and Variations within Their Genome Architecture: Does Nucleotide Distribution and Mutation Rate Alter the Functionality and Evolution of the Virus?关注的 SARS-CoV-2 变体及其基因组结构内的变异:核苷酸分布和突变率是否改变病毒的功能和进化?
Viruses. 2022 Nov 11;14(11):2499. doi: 10.3390/v14112499.
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RASCL: Rapid Assessment of Selection in CLades through molecular sequence analysis.RASCL:通过分子序列分析快速评估 CLade 中的选择。
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Scientific evidence on the origin of SARS-CoV-2.关于 SARS-CoV-2 起源的科学证据。
Environ Res. 2023 Jan 1;216(Pt 2):114631. doi: 10.1016/j.envres.2022.114631. Epub 2022 Oct 19.

本文引用的文献

1
On the origin and continuing evolution of SARS-CoV-2.关于严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的起源及持续进化
Natl Sci Rev. 2020 Jun;7(6):1012-1023. doi: 10.1093/nsr/nwaa036. Epub 2020 Mar 3.
2
Scientific evidence on the origin of SARS-CoV-2.关于严重急性呼吸综合征冠状病毒2(SARS-CoV-2)起源的科学证据。
Environ Res. 2021 Oct;201:111542. doi: 10.1016/j.envres.2021.111542. Epub 2021 Jun 18.
3
SARS-CoV-2: basic concepts, origin and treatment advances.SARS-CoV-2:基本概念、起源和治疗进展。
Gac Med Mex. 2021;157(1):84-89. doi: 10.24875/GMM.M21000524.
4
Generation of restriction endonucleases barcode map to trace SARS-CoV-2 origin and evolution.生成限制酶条码图谱以追踪 SARS-CoV-2 的起源和进化。
Sci Rep. 2021 Jun 3;11(1):11773. doi: 10.1038/s41598-021-91264-6.
5
SARS-CoV-2's claimed natural origin is undermined by issues with genome sequences of its relative strains: Coronavirus sequences RaTG13, MP789 and RmYN02 raise multiple questions to be critically addressed by the scientific community.SARS-CoV-2 的所谓自然起源受到其相关毒株基因组序列问题的破坏:冠状病毒序列 RaTG13、MP789 和 RmYN02 提出了多个问题,需要科学界认真解决。
Bioessays. 2021 Jul;43(7):e2100015. doi: 10.1002/bies.202100015. Epub 2021 May 27.
6
On the Origin of SARS-CoV-2: Did Cell Culture Experiments Lead to Increased Virulence of the Progenitor Virus for Humans?关于 SARS-CoV-2 的起源:细胞培养实验是否导致了人类祖先病毒毒力的增强?
In Vivo. 2021 May-Jun;35(3):1313-1326. doi: 10.21873/invivo.12384. Epub 2021 Apr 28.
7
Analysis of the Genomic Distance Between Bat Coronavirus RaTG13 and SARS-CoV-2 Reveals Multiple Origins of COVID-19.蝙蝠冠状病毒RaTG13与严重急性呼吸综合征冠状病毒2(SARS-CoV-2)之间的基因组距离分析揭示了2019冠状病毒病(COVID-19)的多个起源。
Acta Math Sci. 2021;41(3):1017-1022. doi: 10.1007/s10473-021-0323-x. Epub 2021 Apr 19.
8
Should we discount the laboratory origin of COVID-19?我们是否应该排除新冠病毒源自实验室的可能性?
Environ Chem Lett. 2021;19(4):2743-2757. doi: 10.1007/s10311-021-01211-0. Epub 2021 Mar 25.
9
Evidence for SARS-CoV-2 related coronaviruses circulating in bats and pangolins in Southeast Asia.有证据表明,东南亚的蝙蝠和穿山甲中存在与 SARS-CoV-2 相关的冠状病毒。
Nat Commun. 2021 Feb 9;12(1):972. doi: 10.1038/s41467-021-21240-1.
10
Horizontal gene transfer and recombination analysis of SARS-CoV-2 genes helps discover its close relatives and shed light on its origin.SARS-CoV-2 基因的水平基因转移和重组分析有助于发现其近亲,并揭示其起源。
BMC Ecol Evol. 2021 Jan 21;21(1):5. doi: 10.1186/s12862-020-01732-2.

关于 SARS-CoV-2 的起源,我们已知和未知的情况。

What we know and what we need to know about the origin of SARS-CoV-2.

机构信息

Laboratory of Toxicology and Environmental Health, School of Medicine, Universitat Rovira i Virgili, 43201, Reus, Catalonia, Spain.

出版信息

Environ Res. 2021 Sep;200:111785. doi: 10.1016/j.envres.2021.111785. Epub 2021 Jul 28.

DOI:10.1016/j.envres.2021.111785
PMID:34329631
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8316641/
Abstract

Since the appearance of the first cases of COVID-19 in 2019, an unprecedented number of documents on that disease have been published in a short space of time. The current available information covers a large number of topics related with COVID-19 and/or the coronavirus (SARS-CoV-2) responsible of the disease. However, only a limited number of publications have been focused on a controversial issue: the origin of the SARS-CoV-2. In this paper, the scientific literature on the origin of SARS-CoV-2 has been reviewed. Documents published during 2020 and 2021 (January 1-July 19) in journals that are indexed in PubMed and/or Scopus has been considered. The revised studies were grouped according to these two potential origins: natural and unnatural. The analyses of the conclusions of the different documents here assessed show that even considering the zoonotic hypothesis as the most likely, with bats and pangolins being possibly in the origin of the coronavirus, today's date the intermediate source species of SARS-CoV-2 has not been confirmed yet. On the other hand, some researchers point to an unnatural origin of this coronavirus, but their conclusions are not strongly supported by a clear scientific evidence. Given the tremendous severity of the current pandemic, investigations to establish clearly and definitively the origin of SARS-CoV-2, are basic and essential in order to prevent potential future pandemics of similar nature.

摘要

自 2019 年首次出现 COVID-19 病例以来,在短时间内发表了大量关于该疾病的文献。目前可用的信息涵盖了与 COVID-19 相关的大量主题和/或负责该疾病的冠状病毒(SARS-CoV-2)。然而,只有少数出版物关注一个有争议的问题:SARS-CoV-2 的起源。本文对 SARS-CoV-2 起源的科学文献进行了综述。考虑了 2020 年和 2021 年(1 月 1 日至 7 月 19 日)在 PubMed 和/或 Scopus 索引的期刊上发表的文献。修订后的研究根据这两个潜在的起源进行了分组:自然起源和非自然起源。对这里评估的不同文件的结论进行分析表明,即使考虑到人畜共患病假说最有可能,蝙蝠和穿山甲可能是冠状病毒的起源,但迄今为止,尚未确认 SARS-CoV-2 的中间源物种。另一方面,一些研究人员指出这种冠状病毒的非自然起源,但他们的结论并没有得到明确科学证据的有力支持。鉴于当前大流行的巨大严重性,为了防止类似性质的未来潜在大流行,明确和明确确定 SARS-CoV-2 的起源的调查是基础和必要的。