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作为治疗 COVID-19 的一种疗法,LL-37 的计算机科学基础。

An in silico scientific basis for LL-37 as a therapeutic for Covid-19.

机构信息

Bioinformatics Research Laboratory, Dr. D.Y. Patil Biotechnology and Bioinformatics Institute, Pune, Maharashtra, India.

Dr. D.Y. Patil Biotechnology and Bioinformatics Institute, Dr. D.Y. Patil Vidyapeeth, Bangalore-Mumbai Highway, Pune, Maharashtra, India.

出版信息

Proteins. 2022 May;90(5):1029-1043. doi: 10.1002/prot.26198. Epub 2021 Aug 9.

Abstract

A multi-pronged approach with help in all forms possible is essential to completely overcome the Covid-19 pandemic. There is a requirement to research as many new and different types of approaches as possible to cater to the entire world population, complementing the vaccines with promising results. The need is also because SARS-CoV-2 has several unknown or variable facets which get revealed from time to time. In this work, in silico scientific findings are presented, which are indicative of the potential for the use of the LL-37 human anti-microbial peptide as a therapeutic against SARS-CoV-2. This indication is based on the high structural similarity of LL-37 to the N-terminal helix, with which the virus interacts, of the receptor for SARS-CoV-2, Angiotensin Converting Enzyme 2. Moreover, there is positive prediction of binding of LL-37 to the receptor-binding domain of SARS-CoV-2; this is the first study to have described this interaction. In silico data on the safety of LL-37 are also reported. As Vitamin D is known to upregulate the expression of LL-37, the vitamin is a candidate preventive molecule. This work provides the possible basis for an inverse correlation between Vitamin D levels in the body and the severity of or susceptibility to Covid-19, as widely reported in literature. With the scientific link put forth herein, Vitamin D could be used at an effective, medically prescribed, safe dose as a preventive. The information in this report would be valuable in bolstering the worldwide efforts to eliminate the pandemic as early as possible.

摘要

采取多管齐下的方法,提供各种形式的帮助,对于彻底战胜新冠疫情至关重要。有必要研究尽可能多的新的和不同类型的方法,以满足全球人口的需求,为疫苗提供有希望的补充。这也是因为 SARS-CoV-2 有几个未知或可变的方面,这些方面不时会被揭示出来。在这项工作中,我们提出了计算机科学的研究结果,这些结果表明,使用 LL-37 这种人类抗菌肽作为治疗 SARS-CoV-2 的方法具有潜力。这一指示是基于 LL-37 与 SARS-CoV-2 受体,即血管紧张素转换酶 2 的 N 端螺旋的高度结构相似性。此外,还有 LL-37 与 SARS-CoV-2 的受体结合域结合的阳性预测;这是首次描述这种相互作用的研究。我们还报告了关于 LL-37 安全性的计算机数据。由于维生素 D 已知能上调 LL-37 的表达,因此这种维生素是一种候选预防分子。这项工作为文献中广泛报道的体内维生素 D 水平与新冠病毒严重程度或易感性之间的反比关系提供了可能的基础。有了本文提出的科学联系,维生素 D 可以以有效、医学规定的、安全的剂量作为预防药物使用。本报告中的信息对于加强全球消除大流行的努力将具有重要价值。

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