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分析与构建基于黄芩苷诱导人骨肉瘤细胞凋亡的竞争性内源性 RNA 调控网络。

Analysis and Construction of a Competitive Endogenous RNA Regulatory Network of Baicalin-Induced Apoptosis in Human Osteosarcoma Cells.

机构信息

Department of Orthopaedic Surgery, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong, China.

Guangzhou Key Laboratory of Basic and Applied Research in Oral Regenerative Medicine, Affiliated Stomatology Hospital of Guangzhou Medical University, Guangzhou, Guangdong, China.

出版信息

Biomed Res Int. 2021 Jul 19;2021:9984112. doi: 10.1155/2021/9984112. eCollection 2021.

Abstract

BACKGROUND

Baicalin is an extract from the traditional Chinese herb and has the potential to treat osteosarcoma (OS). However, the transcriptome-level mechanism of baicalin-mediated antitumor effects in OS has not yet been investigated. The aim of this study was to analyze the competitive endogenous RNA (ceRNA) regulatory network involved in baicalin-induced apoptosis of OS cells.

METHODS

In this study, CCK-8 and flow cytometry assays were used to detect the antitumor effects of baicalin on human OS MG63 cells. Furthermore, transcriptome sequencing was employed to establish the long noncoding RNA (lncRNA), microRNA (miRNA), and mRNA profiles.

RESULTS

Baicalin inhibited MG63 cell proliferation and induced apoptosis. Totals of 58 lncRNAs, 31 miRNAs, and 2136 mRNAs in the baicalin-treated MG63 cells were identified as differentially expressed RNAs compared to those in control cells. Of these, 2 lncRNAs, 3 miRNAs, and 18 mRNAs were included in the ceRNA regulatory network. The differentially expressed RNAs were confirmed by quantitative real-time PCR (qRT-PCR).

CONCLUSIONS

By identifying the ceRNA network, our results provide new information about the possible molecular basis of baicalin, which has potential applications in OS treatment.

摘要

背景

黄芩苷是一种从传统中药黄芩中提取的物质,具有治疗骨肉瘤(OS)的潜力。然而,黄芩苷介导的 OS 细胞抗肿瘤作用的转录组水平机制尚未得到研究。本研究旨在分析黄芩苷诱导 OS 细胞凋亡涉及的竞争内源性 RNA(ceRNA)调控网络。

方法

在这项研究中,CCK-8 和流式细胞术检测用于检测黄芩苷对人骨肉瘤 MG63 细胞的抗肿瘤作用。此外,采用转录组测序建立长链非编码 RNA(lncRNA)、微小 RNA(miRNA)和 mRNA 图谱。

结果

黄芩苷抑制 MG63 细胞增殖并诱导细胞凋亡。与对照组细胞相比,黄芩苷处理的 MG63 细胞中共有 58 个 lncRNA、31 个 miRNA 和 2136 个 mRNA 被鉴定为差异表达 RNA。其中,2 个 lncRNA、3 个 miRNA 和 18 个 mRNA 被包含在 ceRNA 调控网络中。通过定量实时 PCR(qRT-PCR)对差异表达的 RNA 进行了验证。

结论

通过鉴定 ceRNA 网络,我们的结果为黄芩苷的可能分子基础提供了新的信息,这在 OS 治疗中有潜在的应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/35ce/8315844/a71c76c10612/BMRI2021-9984112.001.jpg

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