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-斯洛文尼亚2006 - 2020年临床分离株的流行病学与特征分析

-Epidemiology and Characterization of Clinical Isolates, Slovenia, 2006-2020.

作者信息

Keše Darja, Obreza Aljoša, Rojko Tereza, Kišek Tjaša Cerar

机构信息

Faculty of Medicine, Institute of Microbiology and Immunology, University of Ljubljana, Zaloška 4, 1000 Ljubljana, Slovenia.

Department of Infectious Diseases, University Medical Centre Ljubljana, Japljeva 2, 1000 Ljubljana, Slovenia.

出版信息

Diagnostics (Basel). 2021 Jul 2;11(7):1201. doi: 10.3390/diagnostics11071201.

Abstract

is the causative agent of severe Legionnaires' disease (LD). Although an increasing number of LD cases have been observed, published data from Slovenia are very limited and data on molecular epidemiology are even scarcer. The present retrospective study (2006-2020) reports the results of the microbiological diagnosis of LD, as well as the epidemiology and characterization of the clinical isolates. We tested urine samples from 15,540 patients with pneumonia symptoms for infection by urine antigen test, of which 717 (4.6%) tested positive. Isolation of was successfully performed from 88 clinical specimens, with 82 (93.2%) being identified as sg 1 and six (6.8%) as sg 2-14. Sequence-based typing (SBT) identified 33 different sequence types (STs), the most frequent being ST1 and ST23. Sequence type 1 mainly comprised isolates belonging to the Philadelphia subgroup, and ST23 mostly to Allentown/France. The standard SBT scheme, as well as Dresden phenotyping for presented a high diversity among isolates.

摘要

是重症军团病(LD)的病原体。尽管已观察到越来越多的LD病例,但斯洛文尼亚公布的数据非常有限,分子流行病学数据甚至更少。本回顾性研究(2006 - 2020年)报告了LD的微生物诊断结果,以及临床分离株的流行病学和特征。我们对15540例有肺炎症状的患者的尿液样本进行了尿抗原检测以检测感染情况,其中717例(4.6%)检测呈阳性。从88份临床标本中成功分离出,其中82份(93.2%)被鉴定为1型菌株,6份(6.8%)为2 - 14型菌株。基于序列的分型(SBT)鉴定出33种不同的序列类型(STs),最常见的是ST1和ST23。序列类型1主要包括属于费城亚组的分离株,ST23大多属于阿伦敦/法国亚组。标准的SBT方案以及针对的德累斯顿表型分析显示分离株之间具有高度多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81c/8308060/352f2896d7ee/diagnostics-11-01201-g001.jpg

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