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镉污染对耕地土壤细菌群落结构的影响及抗镉细菌的分离

Cadmium Pollution Impact on the Bacterial Community Structure of Arable Soil and the Isolation of the Cadmium Resistant Bacteria.

作者信息

Yu Xiaoxia, Zhao JinTong, Liu Xiaoqing, Sun LiXin, Tian Jian, Wu Ningfeng

机构信息

School of Water Resources and Environmental Engineering, East China University of Technology, Nanchang, China.

Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China.

出版信息

Front Microbiol. 2021 Jul 22;12:698834. doi: 10.3389/fmicb.2021.698834. eCollection 2021.

Abstract

Microorganisms play an important role in the remediation of cadmium pollution in the soil and their diversity can be affected by cadmium. In this study, the bacterial community in arable soil samples collected from two near geographical sites, with different degrees of cadmium pollution at three different seasons, were characterized using Illumina MiSeq sequencing. The result showed that cadmium is an important factor to affect the bacterial diversity and the microbial communities in the high cadmium polluted area (the site H) had significant differences compared with low cadmium polluted area (the site L). Especially, higher concentrations of Cd significantly increased the abundance of Proteobacteria and Gemmatimonas whereas decreased the abundance of Nitrospirae. Moreover, 42 Cd-resistant bacteria were isolated from six soil samples and evaluated for potential application in Cd bioremediation. Based on their Cd-MIC [minimum inhibitory concentration (MIC) of Cd], Cd removal rate and 16S rDNA gene sequence analyses, three sp. strains (ha-1, hj-2, and ho-3) showed very high tolerance to Cd (5, 5, and 6 mM) and exhibited high Cd removal rate (81.78, 79.37, and 63.05%), six sp. strains (151-5,151-6,151-13, 151-20, and 151-21) showed moderate tolerance to Cd (0.8, 0.4, 0.8, 0.4, 0.6, and 0.4 mM) but high Cd removal rate (84.78, 90.14, 82.82, 82.39, 81.79, and 84.17%). Those results indicated that sp. belonging to the phylum Proteobacteria and sp. belonging to the phylum Firmicutes have developed a resistance for cadmium and may play an important role in Cd-contaminated soils. Our study provided baseline data for bacterial communities in cadmium polluted soils and concluded that Cd-resistant bacteria have potential for bioremediation of Cd-contaminated soils.

摘要

微生物在土壤镉污染修复中发挥着重要作用,其多样性会受到镉的影响。在本研究中,利用Illumina MiSeq测序对从两个地理位置相近、镉污染程度不同的地点采集的耕地土壤样本在三个不同季节的细菌群落进行了表征。结果表明,镉是影响细菌多样性的重要因素,高镉污染区(H点)的微生物群落与低镉污染区(L点)相比存在显著差异。特别是,较高浓度的镉显著增加了变形菌门和芽单胞菌属的丰度,而降低了硝化螺旋菌门的丰度。此外,从六个土壤样本中分离出42株耐镉细菌,并评估了它们在镉生物修复中的潜在应用。基于它们的镉最低抑菌浓度(Cd-MIC)、镉去除率和16S rDNA基因序列分析,三株菌株(ha-1、hj-2和ho-3)对镉表现出极高的耐受性(5、5和6 mM),并具有较高的镉去除率(81.78%、79.37%和63.05%),六株菌株(151-5、151-6、151-13、151-20和151-21)对镉表现出中等耐受性(0.8、0.4、0.8、0.4、0.6和0.4 mM)但镉去除率较高(84.78%、90.14%、82.82%、82.39%、81.79%和84.17%)。这些结果表明,变形菌门的菌株和厚壁菌门的菌株对镉产生了抗性,可能在镉污染土壤中发挥重要作用。我们的研究为镉污染土壤中的细菌群落提供了基线数据,并得出结论,耐镉细菌具有生物修复镉污染土壤的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8bf/8339475/692806c57529/fmicb-12-698834-g003.jpg

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