• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Insight into the function of active site residues in the catalytic mechanism of human ferrochelatase.深入了解人铁螯合酶催化机制中活性位点残基的功能。
Biochem J. 2021 Sep 17;478(17):3239-3252. doi: 10.1042/BCJ20210460.
2
Human ferrochelatase: characterization of substrate-iron binding and proton-abstracting residues.人铁螯合酶:底物-铁结合和质子提取残基的表征
Biochemistry. 2001 Aug 21;40(33):9821-7. doi: 10.1021/bi010012c.
3
Dissection of porphyrin-induced conformational dynamics in the heme biosynthesis enzyme ferrochelatase.血红素生物合成酶亚铁螯合酶中卟啉诱导构象动力学的剖析。
Biochemistry. 2012 Sep 11;51(36):7116-27. doi: 10.1021/bi300704c. Epub 2012 Aug 29.
4
Altered orientation of active site residues in variants of human ferrochelatase. Evidence for a hydrogen bond network involved in catalysis.人铁螯合酶变体中活性位点残基的取向改变。参与催化的氢键网络的证据。
Biochemistry. 2007 Jul 10;46(27):7973-9. doi: 10.1021/bi700151f. Epub 2007 Jun 14.
5
Amino acid residues His183 and Glu264 in Bacillus subtilis ferrochelatase direct and facilitate the insertion of metal ion into protoporphyrin IX.枯草芽孢杆菌亚铁螯合酶中的组氨酸183和谷氨酸264氨基酸残基引导并促进金属离子插入原卟啉IX。
Biochemistry. 2007 Jan 9;46(1):87-94. doi: 10.1021/bi061760a.
6
Human Ferrochelatase: Insights for the Mechanism of Ferrous Iron Approaching Protoporphyrin IX by QM/MM and QTCP Free Energy Studies.人亚铁螯合酶:QM/MM 和 QTCP 自由能研究揭示亚铁离子接近原卟啉 IX 的机制。
J Chem Inf Model. 2016 Dec 27;56(12):2421-2433. doi: 10.1021/acs.jcim.6b00216. Epub 2016 Nov 17.
7
The conserved active-site loop residues of ferrochelatase induce porphyrin conformational changes necessary for catalysis.亚铁螯合酶保守的活性位点环残基诱导催化所需的卟啉构象变化。
Biochemistry. 2006 Mar 7;45(9):2904-12. doi: 10.1021/bi051907i.
8
Identification and characterization of solvent-filled channels in human ferrochelatase.鉴定和描述人亚铁螯合酶中的溶剂填充通道。
Biochemistry. 2012 Jul 10;51(27):5422-33. doi: 10.1021/bi300598g. Epub 2012 Jun 28.
9
Product release rather than chelation determines metal specificity for ferrochelatase.对于亚铁螯合酶而言,决定金属特异性的是产物释放而非螯合作用。
J Mol Biol. 2009 Oct 23;393(2):308-19. doi: 10.1016/j.jmb.2009.08.042. Epub 2009 Aug 22.
10
A pi-helix switch selective for porphyrin deprotonation and product release in human ferrochelatase.一种对人亚铁螯合酶中卟啉去质子化和产物释放具有选择性的π-螺旋开关。
J Mol Biol. 2007 Nov 2;373(4):1006-16. doi: 10.1016/j.jmb.2007.08.040. Epub 2007 Aug 23.

引用本文的文献

1
Regulation of the expression of ferrochelatase in a murine model of diabetes mellitus type I.I型糖尿病小鼠模型中铁螯合酶表达的调控
Biochem Biophys Rep. 2025 Mar 28;42:101989. doi: 10.1016/j.bbrep.2025.101989. eCollection 2025 Jun.
2
Structural Insights into Mechanisms Underlying Mitochondrial and Bacterial Cytochrome c Synthases.线粒体和细菌细胞色素c合酶潜在机制的结构见解
Biomolecules. 2024 Nov 21;14(12):1483. doi: 10.3390/biom14121483.
3
Iron insertion into coproporphyrin III-ferrochelatase complex: Evidence for an intermediate distorted catalytic species.铁插入粪卟啉 III-亚铁螯合酶复合物:中间扭曲的催化物种的证据。
Protein Sci. 2023 Nov;32(11):e4788. doi: 10.1002/pro.4788.
4
Structural aspects of enzymes involved in prokaryotic Gram-positive heme biosynthesis.原核革兰氏阳性菌血红素生物合成中相关酶的结构方面
Comput Struct Biotechnol J. 2023 Jul 24;21:3933-3945. doi: 10.1016/j.csbj.2023.07.024. eCollection 2023.
5
Ferrochelatase: Mapping the Intersection of Iron and Porphyrin Metabolism in the Mitochondria.亚铁螯合酶:定位线粒体中铁与卟啉代谢的交叉点
Front Cell Dev Biol. 2022 May 12;10:894591. doi: 10.3389/fcell.2022.894591. eCollection 2022.
6
Iron, Heme Synthesis and Erythropoietic Porphyrias: A Complex Interplay.铁、血红素合成与红细胞生成性卟啉病:复杂的相互作用
Metabolites. 2021 Nov 23;11(12):798. doi: 10.3390/metabo11120798.

本文引用的文献

1
Crystal structures and calorimetry reveal catalytically relevant binding mode of coproporphyrin and coproheme in coproporphyrin ferrochelatase.晶体结构和量热法揭示了粪卟啉原氧化酶中粪卟啉和原卟啉钴的催化相关结合模式。
FEBS J. 2020 Jul;287(13):2779-2796. doi: 10.1111/febs.15164. Epub 2019 Dec 19.
2
Erythropoietin signaling regulates heme biosynthesis.促红细胞生成素信号传导调节血红素生物合成。
Elife. 2017 May 29;6:e24767. doi: 10.7554/eLife.24767.
3
Prokaryotic Heme Biosynthesis: Multiple Pathways to a Common Essential Product.原核生物血红素生物合成:通往共同必需产物的多种途径。
Microbiol Mol Biol Rev. 2017 Jan 25;81(1). doi: 10.1128/MMBR.00048-16. Print 2017 Mar.
4
Human Ferrochelatase: Insights for the Mechanism of Ferrous Iron Approaching Protoporphyrin IX by QM/MM and QTCP Free Energy Studies.人亚铁螯合酶:QM/MM 和 QTCP 自由能研究揭示亚铁离子接近原卟啉 IX 的机制。
J Chem Inf Model. 2016 Dec 27;56(12):2421-2433. doi: 10.1021/acs.jcim.6b00216. Epub 2016 Nov 17.
5
Identification of the Mitochondrial Heme Metabolism Complex.线粒体血红素代谢复合物的鉴定
PLoS One. 2015 Aug 19;10(8):e0135896. doi: 10.1371/journal.pone.0135896. eCollection 2015.
6
Noncanonical coproporphyrin-dependent bacterial heme biosynthesis pathway that does not use protoporphyrin.不使用原卟啉的非经典粪卟啉依赖性细菌血红素生物合成途径。
Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2210-5. doi: 10.1073/pnas.1416285112. Epub 2015 Feb 2.
7
Investigation by MD simulation of the key residues related to substrate-binding and heme-release in human ferrochelatase.通过 MD 模拟研究人亚铁螯合酶中与底物结合和血红素释放相关的关键残基。
J Mol Model. 2013 Jun;19(6):2509-18. doi: 10.1007/s00894-013-1789-9. Epub 2013 Feb 28.
8
Is it possible for Fe2+ to approach protoporphyrin IX from the side of Tyr-13 in Bacillus subtilis ferrochelatase? An answer from QM/MM study.Fe2+ 是否有可能从枯草芽孢杆菌亚铁螯合酶 Tyr-13 一侧接近原卟啉 IX?QM/MM 研究的答案。
J Mol Model. 2013 Feb;19(2):963-71. doi: 10.1007/s00894-012-1627-5. Epub 2012 Oct 25.
9
Dissection of porphyrin-induced conformational dynamics in the heme biosynthesis enzyme ferrochelatase.血红素生物合成酶亚铁螯合酶中卟啉诱导构象动力学的剖析。
Biochemistry. 2012 Sep 11;51(36):7116-27. doi: 10.1021/bi300704c. Epub 2012 Aug 29.
10
Identification and characterization of solvent-filled channels in human ferrochelatase.鉴定和描述人亚铁螯合酶中的溶剂填充通道。
Biochemistry. 2012 Jul 10;51(27):5422-33. doi: 10.1021/bi300598g. Epub 2012 Jun 28.

深入了解人铁螯合酶催化机制中活性位点残基的功能。

Insight into the function of active site residues in the catalytic mechanism of human ferrochelatase.

作者信息

Medlock Amy E, Najahi-Missaoui Wided, Shiferaw Mesafint T, Albetel Angela N, Lanzilotta William N, Dailey Harry A

机构信息

Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, U.S.A.

Augusta University/University of Georgia Medical Partnership, Athens, GA 30602, U.S.A.

出版信息

Biochem J. 2021 Sep 17;478(17):3239-3252. doi: 10.1042/BCJ20210460.

DOI:10.1042/BCJ20210460
PMID:34402499
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9138182/
Abstract

Ferrochelatase catalyzes the insertion of ferrous iron into a porphyrin macrocycle to produce the essential cofactor, heme. In humans this enzyme not only catalyzes the terminal step, but also serves a regulatory step in the heme synthesis pathway. Over a dozen crystal structures of human ferrochelatase have been solved and many variants have been characterized kinetically. In addition, hydrogen deuterium exchange, resonance Raman, molecular dynamics, and high level quantum mechanic studies have added to our understanding of the catalytic cycle of the enzyme. However, an understanding of how the metal ion is delivered and the specific role that active site residues play in catalysis remain open questions. Data are consistent with metal binding and insertion occurring from the side opposite from where pyrrole proton abstraction takes place. To better understand iron delivery and binding as well as the role of conserved residues in the active site, we have constructed and characterized a series of enzyme variants. Crystallographic studies as well as rescue and kinetic analysis of variants were performed. Data from these studies are consistent with the M76 residue playing a role in active site metal binding and formation of a weak iron protein ligand being necessary for product release. Additionally, structural data support a role for E343 in proton abstraction and product release in coordination with a peptide loop composed of Q302, S303 and K304 that act a metal sensor.

摘要

亚铁螯合酶催化亚铁离子插入卟啉大环中,以产生必需的辅因子血红素。在人类中,这种酶不仅催化最后一步反应,还在血红素合成途径中起调节作用。人类亚铁螯合酶的十几个晶体结构已被解析,许多变体也已进行了动力学表征。此外,氢氘交换、共振拉曼光谱、分子动力学和高水平量子力学研究增进了我们对该酶催化循环的理解。然而,关于金属离子如何传递以及活性位点残基在催化中所起的具体作用仍未解决。数据表明金属结合和插入发生在与吡咯质子提取相反的一侧。为了更好地理解铁的传递和结合以及活性位点中保守残基的作用,我们构建并表征了一系列酶变体。进行了晶体学研究以及变体的挽救和动力学分析。这些研究的数据表明,M76残基在活性位点金属结合中起作用,并且形成弱铁蛋白配体对于产物释放是必要的。此外,结构数据支持E343在质子提取和产物释放中与由Q302、S303和K304组成的肽环协同作用,该肽环充当金属传感器。