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细菌自然转化系统的激活与限制:其在基因组进化与稳定性中的作用

The activation and limitation of the bacterial natural transformation system: The function in genome evolution and stability.

作者信息

Huang Mi, Liu Mafeng, Huang Li, Wang Mingshu, Jia Renyong, Zhu Dekang, Chen Shun, Zhao Xinxin, Zhang Shaqiu, Gao Qun, Zhang Ling, Cheng Anchun

机构信息

Institute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, Sichuan, 611130, PR China; Research Centre of Avian Disease, College of Veterinary Medicine of Sichuan Agricultural University, Chengdu, Sichuan, 611130, PR China; Key Laboratory of Animal Disease and Human Health of Sichuan Province, Chengdu, Sichuan, 611130, PR China.

Institute of Preventive Veterinary Medicine, Sichuan Agricultural University, Chengdu, Sichuan, 611130, PR China; Research Centre of Avian Disease, College of Veterinary Medicine of Sichuan Agricultural University, Chengdu, Sichuan, 611130, PR China; Key Laboratory of Animal Disease and Human Health of Sichuan Province, Chengdu, Sichuan, 611130, PR China.

出版信息

Microbiol Res. 2021 Nov;252:126856. doi: 10.1016/j.micres.2021.126856. Epub 2021 Aug 24.

Abstract

Bacteria can take up exogenous naked DNA and integrate it into their genomes, which has been regarded as a main contributor to bacterial evolution. The competent status of bacteria is influenced by environmental cues and by the immune systems of bacteria. Here, we review recent advances in understanding the working mechanisms underlying activation of the natural transformation system and limitations thereof. Environmental stresses including the presence of antimicrobials can activate the natural transformation system. However, bacterial enzymes (nucleases), non-coding RNAs, specific DNA sequences, the restriction-modification (R-M) systems, CRISPR-Cas systems and prokaryotic Argonaute proteins (Agos) are have been found to be involved in the limitation of the natural transformation system. Together, this review represents an opportunity to gain insight into bacterial genome stability and evolution.

摘要

细菌能够摄取外源裸露DNA并将其整合到自身基因组中,这被认为是细菌进化的主要因素。细菌的感受态状态受环境信号和细菌免疫系统的影响。在此,我们综述了在理解自然转化系统激活的工作机制及其局限性方面的最新进展。包括抗菌剂存在在内的环境压力能够激活自然转化系统。然而,已发现细菌酶(核酸酶)、非编码RNA、特定DNA序列、限制修饰(R-M)系统、CRISPR-Cas系统和原核Argonaute蛋白(Agos)参与了对自然转化系统的限制。总之,本综述为深入了解细菌基因组稳定性和进化提供了契机。

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