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间型霉素,一种通过宏基因组来源的生物合成途径异源表达发现的新型生物活性金霉素。

Metathramycin, a new bioactive aureolic acid discovered by heterologous expression of a metagenome derived biosynthetic pathway.

作者信息

Stevenson Luke J, Bracegirdle Joe, Liu Liwei, Sharrock Abigail V, Ackerley David F, Keyzers Robert A, Owen Jeremy G

机构信息

School of Biological Sciences, Victoria University of Wellington Wellington New Zealand

Maurice Wilkins Centre for Molecular Biodiscovery New Zealand.

出版信息

RSC Chem Biol. 2021 Feb 2;2(2):556-567. doi: 10.1039/d0cb00228c. eCollection 2021 Apr 1.

Abstract

Bacterial natural products have been a rich source of bioactive compounds for drug development, and advances in DNA sequencing, informatics and molecular biology have opened new avenues for their discovery. Here, we describe the isolation of an aureolic acid biosynthetic gene cluster from a metagenome library derived from a New Zealand soil sample. Heterologous expression of this pathway in resulted in the production and isolation of two new aureolic acid compounds, one of which (metathramycin, ) possesses potent bioactivity against a human colon carcinoma cell line (HCT-116, IC = 14.6 nM). As metathramycin was a minor constituent of the fermentation extract, its discovery relied on a combination of approaches including bioactivity guided fractionation, MS/MS characterisation and pathway engineering. This study not only demonstrates the presence of previously uncharacterised aureolic acids in the environment, but also the value of an integrated natural product discovery approach which may be generally applicable to low abundance bioactive metabolites.

摘要

细菌天然产物一直是药物开发中生物活性化合物的丰富来源,而DNA测序、信息学和分子生物学的进展为其发现开辟了新途径。在此,我们描述了从一份源自新西兰土壤样本的宏基因组文库中分离出一个金霉素生物合成基因簇。该途径在[具体宿主]中的异源表达导致了两种新的金霉素化合物的产生和分离,其中一种(间色霉素,[具体名称])对人结肠癌细胞系(HCT - 116,IC = 14.6 nM)具有强大的生物活性。由于间色霉素是发酵提取物中的次要成分,其发现依赖于多种方法的组合,包括生物活性导向分级分离、MS/MS表征和途径工程。这项研究不仅证明了环境中存在以前未表征的金霉素,还证明了一种综合天然产物发现方法的价值,该方法可能普遍适用于低丰度生物活性代谢物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/501d/8341913/ebe5598b8461/d0cb00228c-f1.jpg

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