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通过综合分析鉴定与结直肠癌肝转移相关的枢纽基因

Identification of Hub Genes Related to Liver Metastasis of Colorectal Cancer by Integrative Analysis.

作者信息

Liu Sicheng, Zhang Yaguang, Zhang Su, Qiu Lei, Zhang Bo, Han Junhong

机构信息

Research Laboratory of Cancer Epigenetics and Genomics, Department of General Surgery, Frontiers Science Center for Disease-Related Molecular Network, State Key Laboratory of Biotherapy and National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, China.

Research Laboratory of Cancer Epigenetics and Genomics, Department of General Surgery, Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu, China.

出版信息

Front Oncol. 2021 Aug 19;11:714866. doi: 10.3389/fonc.2021.714866. eCollection 2021.

DOI:10.3389/fonc.2021.714866
PMID:34490113
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8417325/
Abstract

Liver metastasis of colorectal cancer (LMCRC) severely damages patient health, causing poor prognosis and tumor relapse. Marker genes associated with LMCRC identified by previous study did not meet therapeutic demand. Therefore, it is necessary to identify new biomarkers regulating the metastasis network and screen potential drugs for future treatment. Here, we identified that cell adhesion molecules and peroxisome proliferator-activated receptor (PPAR) signaling pathway were significantly enriched by analyzing the integrated-multiple expression profiles. Moreover, analysis with robust rank aggregation approach revealed a total of 138 differentially expressed genes (DEGs), including 108 upexpressed and 30 downexpressed genes. With establishing protein-protein interaction network, we also identified the subnetwork significantly enriching the metastasis-associated hub genes including ALB, APOE, CDH2, and ORM1. ESR2, FOXO3, and SRY were determined as key transcription factors regulating hub genes. In addition, ADH-1, epigallocatechin, CHEMBL1945287, and cochinchinenin C were predicted as potential therapeutic drugs. Moreover, the antimigration capacity of ADH-1 and epigallocatechin were confirmed in CRC cell lines. In conclusion, our findings not only offer opportunities to understand metastasis mechanism but also identify potential therapeutic targets for CRC.

摘要

结直肠癌肝转移(LMCRC)严重损害患者健康,导致预后不良和肿瘤复发。先前研究确定的与LMCRC相关的标志物基因无法满足治疗需求。因此,有必要识别调控转移网络的新生物标志物并筛选潜在药物用于未来治疗。在此,我们通过分析整合的多个表达谱,确定细胞粘附分子和过氧化物酶体增殖物激活受体(PPAR)信号通路显著富集。此外,采用稳健秩聚合方法分析共揭示了138个差异表达基因(DEG),包括108个上调基因和30个下调基因。通过建立蛋白质-蛋白质相互作用网络,我们还确定了显著富集包括ALB、APOE、CDH2和ORM1在内的转移相关枢纽基因的子网。ESR2、FOXO3和SRY被确定为调控枢纽基因的关键转录因子。此外,ADH-1、表没食子儿茶素、CHEMBL1945287和柯里拉京C被预测为潜在治疗药物。此外,ADH-1和表没食子儿茶素在结直肠癌细胞系中的抗迁移能力得到了证实。总之,我们的研究结果不仅为理解转移机制提供了机会,还确定了结直肠癌的潜在治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/ccfda15455c2/fonc-11-714866-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/d5366cd2a963/fonc-11-714866-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/31c71b445cdb/fonc-11-714866-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/ccfda15455c2/fonc-11-714866-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/d5366cd2a963/fonc-11-714866-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/84a48466eaf0/fonc-11-714866-g003.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/e29838d103ea/fonc-11-714866-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/0332f9f9534c/fonc-11-714866-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/31c71b445cdb/fonc-11-714866-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f0c/8417325/ccfda15455c2/fonc-11-714866-g009.jpg

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Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.《全球癌症统计数据 2020:全球 185 个国家和地区 36 种癌症的发病率和死亡率估计》。
CA Cancer J Clin. 2021 May;71(3):209-249. doi: 10.3322/caac.21660. Epub 2021 Feb 4.
2
PubChem in 2021: new data content and improved web interfaces.PubChem 在 2021 年:新增数据内容和改进的网络界面。
Nucleic Acids Res. 2021 Jan 8;49(D1):D1388-D1395. doi: 10.1093/nar/gkaa971.
3
The FABP12/PPARγ pathway promotes metastatic transformation by inducing epithelial-to-mesenchymal transition and lipid-derived energy production in prostate cancer cells.
Application of Machine Learning in Predicting Hepatic Metastasis or Primary Site in Gastroenteropancreatic Neuroendocrine Tumors.
机器学习在预测胃肠胰神经内分泌肿瘤肝转移或原发部位中的应用。
Curr Oncol. 2023 Oct 19;30(10):9244-9261. doi: 10.3390/curroncol30100668.
4
ORM1 promotes tumor progression of kidney renal clear cell carcinoma (KIRC) through CALR-mediated apoptosis.ORM1 通过 CALR 介导线粒体凋亡促进肾透明细胞肾细胞癌 (KIRC) 的肿瘤进展。
Sci Rep. 2023 Sep 21;13(1):15687. doi: 10.1038/s41598-023-42962-w.
5
Orosomucoid 1 promotes colorectal cancer progression and liver metastasis by affecting PI3K/AKT pathway and inducing macrophage M2 polarization.黏蛋白 1 可通过影响 PI3K/AKT 通路和诱导巨噬细胞 M2 极化促进结直肠癌的进展和肝转移。
Sci Rep. 2023 Aug 28;13(1):14092. doi: 10.1038/s41598-023-40404-1.
6
Hepatic passaging of NRAS-mutant melanoma influences adhesive properties and metastatic pattern.NRAS 突变型黑色素瘤的肝内转移影响黏附特性和转移模式。
BMC Cancer. 2023 May 13;23(1):436. doi: 10.1186/s12885-023-10912-4.
7
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8
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8
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Oncol Rep. 2019 Jan;41(1):279-291. doi: 10.3892/or.2018.6840. Epub 2018 Nov 1.
9
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10
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Int J Mol Sci. 2018 Sep 20;19(10):2860. doi: 10.3390/ijms19102860.