Department of Structural Biology, Stanford University, Stanford, CA 94305, USA.
Department of Structural Biology, Stanford University, Stanford, CA 94305, USA.
Mol Cell. 2021 Nov 4;81(21):4369-4376.e3. doi: 10.1016/j.molcel.2021.08.020. Epub 2021 Sep 13.
Chromatin fibers must fold or coil in the process of chromosome condensation. Patterns of coiling have been demonstrated for reconstituted chromatin, but the actual trajectories of fibers in condensed states of chromosomes could not be visualized because of the high density of the material. We have exploited partial decondensation of mitotic chromosomes to reveal their internal structure at sub-nucleosomal resolution by cryo-electron tomography, without the use of stains, fixatives, milling, or sectioning. DNA gyres around nucleosomes were visible, allowing the nucleosomes to be identified and their orientations to be determined. Linker DNA regions were traced, revealing the trajectories of the chromatin fibers. The trajectories were irregular, with almost no evidence of coiling and no short- or long-range order of the chromosomal material. The 146-bp core particle, long known as a product of nuclease digestion, is identified as the native state of the nucleosome, with no regular spacing along the chromatin fibers.
染色质纤维在染色体浓缩过程中必须折叠或螺旋化。已证明重组染色质存在螺旋模式,但由于材料密度高,无法观察到浓缩状态下纤维的实际轨迹。我们利用有丝分裂染色体的部分去浓缩来揭示其内部结构,分辨率达到亚核小体水平,而无需使用染色剂、固定剂、研磨或切片。核小体周围的 DNA 回旋结构可见,允许识别核小体并确定其取向。连接 DNA 区域被追踪,揭示了染色质纤维的轨迹。这些轨迹不规则,几乎没有螺旋化的证据,染色体物质也没有短程或长程有序性。146 个碱基对的核心颗粒长期以来一直被认为是核酸酶消化的产物,被确定为核小体的天然状态,在染色质纤维上没有规则的间隔。