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对光感受器介导的转录变化的全球分析揭示了丝状真菌中中心代谢与DNA修复之间的复杂关系。

A Global Analysis of Photoreceptor-Mediated Transcriptional Changes Reveals the Intricate Relationship Between Central Metabolism and DNA Repair in the Filamentous Fungus .

作者信息

Pola-Sánchez Enrique, Villalobos-Escobedo José Manuel, Carreras-Villaseñor Nohemí, Martínez-Hernández Pedro, Beltrán-Hernández Emma Beatriz, Esquivel-Naranjo Edgardo Ulises, Herrera-Estrella Alfredo

机构信息

Laboratorio Nacional de Genómica para la Biodiversidad-Unidad de Genómica Avanzada, Centro de Investigación y de Estudios Avanzados del IPN, Irapuato, Mexico.

Red de Estudios Moleculares Avanzados, Instituto de Ecología A.C, Xalapa, Mexico.

出版信息

Front Microbiol. 2021 Sep 8;12:724676. doi: 10.3389/fmicb.2021.724676. eCollection 2021.

DOI:10.3389/fmicb.2021.724676
PMID:34566928
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8456097/
Abstract

Light provides critical information for the behavior and development of basically all organisms. Filamentous fungi sense blue light, mainly, through a unique transcription factor complex that activates its targets in a light-dependent manner. In , the BLR-1 and BLR-2 proteins constitute this complex, which triggers the light-dependent formation of asexual reproduction structures (conidia). We generated an ENVOY photoreceptor mutant and performed RNA-seq analyses in the mutants of this gene and in those of the BLR-1, CRY-1 and CRY-DASH photoreceptors in response to a pulse of low intensity blue light. Like in other filamentous fungi BLR-1 appears to play a central role in the regulation of blue-light responses. Phenotypic characterization of the Δ-1 mutant showed that ENVOY functions as a growth and conidiation checkpoint, preventing exacerbated light responses. Similarly, we observed that CRY-1 and CRY-DASH contribute to the typical light-induced conidiation response. In the Δ-1 mutant, we observed, at the transcriptomic level, a general induction of DNA metabolic processes and strong repression of central metabolism. An analysis of the expression level of DNA repair genes showed that they increase their expression in the absence of -1. Consistently, photoreactivation experiments showed that Δ-1 had increased DNA repair capacity. Our results indicate that light perception in is far more complex than originally thought.

摘要

光为基本上所有生物体的行为和发育提供关键信息。丝状真菌主要通过一种独特的转录因子复合物感知蓝光,该复合物以光依赖的方式激活其靶标。在[具体真菌名称未给出]中,BLR - 1和BLR - 2蛋白构成了这个复合物,它触发无性繁殖结构(分生孢子)的光依赖性形成。我们生成了一个ENVOY光感受器突变体,并对该基因的突变体以及BLR - 1、CRY - 1和CRY - DASH光感受器的突变体进行了RNA测序分析,以响应低强度蓝光脉冲。与其他丝状真菌一样,BLR - 1似乎在蓝光反应的调节中起核心作用。Δ - 1突变体的表型特征表明,ENVOY作为生长和分生孢子形成的检查点,防止过度的光反应。同样,我们观察到CRY - 1和CRY - DASH有助于典型的光诱导分生孢子形成反应。在Δ - 1突变体中,我们在转录组水平上观察到DNA代谢过程的普遍诱导和中心代谢的强烈抑制。对DNA修复基因表达水平的分析表明,它们在缺乏 - 1时增加表达。一致地,光复活实验表明Δ - 1具有增强的DNA修复能力。我们的结果表明,[具体真菌名称未给出]中的光感知比最初认为的要复杂得多。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/5401bae0be37/fmicb-12-724676-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/70eaed7b5cef/fmicb-12-724676-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/6b7b8b252060/fmicb-12-724676-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/62a63b51cd7a/fmicb-12-724676-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/ef214e13bfe9/fmicb-12-724676-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/01ebcbffc822/fmicb-12-724676-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/65f2c43ac97f/fmicb-12-724676-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/5401bae0be37/fmicb-12-724676-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/70eaed7b5cef/fmicb-12-724676-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/6b7b8b252060/fmicb-12-724676-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/62a63b51cd7a/fmicb-12-724676-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/ef214e13bfe9/fmicb-12-724676-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/01ebcbffc822/fmicb-12-724676-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/65f2c43ac97f/fmicb-12-724676-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef2b/8456097/5401bae0be37/fmicb-12-724676-g007.jpg

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