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17 个伊朗近亲家系的全外显子组测序扩大了遗传性视网膜营养不良的突变谱。

Whole exome sequencing in 17 consanguineous Iranian pedigrees expands the mutational spectrum of inherited retinal dystrophies.

机构信息

Division of Genetic Medicine, Lausanne University Hospital and University of Lausanne, Lausanne, Switzerland.

Noncommunicable Diseases Research Center, Fasa University of Medical Sciences, Fasa, Iran.

出版信息

Sci Rep. 2021 Sep 29;11(1):19332. doi: 10.1038/s41598-021-98677-3.

Abstract

Inherited retinal dystrophies (IRDs) constitute one of the most heterogeneous groups of Mendelian human disorders. Using autozygome-guided next-generation sequencing methods in 17 consanguineous pedigrees of Iranian descent with isolated or syndromic IRD, we identified 17 distinct genomic variants in 11 previously-reported disease genes. Consistent with a recessive inheritance pattern, as suggested by pedigrees, variants discovered in our study were exclusively bi-allelic and mostly in a homozygous state (in 15 families out of 17, or 88%). Out of the 17 variants identified, 5 (29%) were never reported before. Interestingly, two mutations (GUCY2D:c.564dup, p.Ala189ArgfsTer130 and TULP1:c.1199G > A, p.Arg400Gln) were also identified in four separate pedigrees (two pedigrees each). In addition to expanding the mutational spectrum of IRDs, our findings confirm that the traditional practice of endogamy in the Iranian population is a prime cause for the appearance of IRDs.

摘要

遗传性视网膜营养不良(IRDs)是孟德尔人类疾病中最具异质性的疾病群体之一。在 17 个具有孤立或综合征性 IRD 的伊朗血统的近亲系中,我们使用自动基因座引导的下一代测序方法,在 11 个先前报道的疾病基因中鉴定出 17 个不同的基因组变异。与家谱所提示的隐性遗传模式一致,我们研究中发现的变异是纯合的,且通常是双等位基因(在 17 个家系中的 15 个,即 88%)。在鉴定出的 17 个变异中,有 5 个(29%)以前从未报道过。有趣的是,两个突变(GUCY2D:c.564dup,p.Ala189ArgfsTer130 和 TULP1:c.1199G > A,p.Arg400Gln)也在四个独立的家系(每个家系两个)中被鉴定出来。除了扩展 IRDs 的突变谱外,我们的发现还证实了伊朗人群中传统的近亲通婚习俗是 IRDs 出现的主要原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5489/8481312/be33f1797816/41598_2021_98677_Fig1a_HTML.jpg

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