Department of Oncology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Department of Thyroid, Breast and Vascular Surgery, Xijing Hospital, The Air Force Medical University, Xi'an, China.
Cancer Med. 2021 Nov;10(22):8222-8237. doi: 10.1002/cam4.4317. Epub 2021 Oct 5.
Ovarian cancer (OV) is deemed the most lethal gynecological cancer in women. The aim of this study was to construct an effective gene prognostic model for predicting overall survival (OS) in patients with OV.
The expression profiles of glycolysis-related genes (GRGs) and clinical data of patients with OV were extracted from The Cancer Genome Atlas (TCGA) database. Univariate, multivariate, and least absolute shrinkage and selection operator Cox regression analyses were conducted, and a prognostic signature based on GRGs was constructed. The predictive ability of the signature was analyzed using training and test sets.
A gene risk signature based on nine GRGs (ISG20, CITED2, PYGB, IRS2, ANGPTL4, TGFBI, LHX9, PC, and DDIT4) was identified to predict the survival outcome of patients with OV. The signature showed a good prognostic ability for OV, particularly high-grade OV, in the TCGA dataset, with areas under the curve (AUC) of 0.709 and 0.762 for 3- and 5-year survival, respectively. Similar results were found in the test sets, and the AUCs of 3-, 5-year OS were 0.714 and 0.772 in the combined test set. And our signature was an independent prognostic factor. Moreover, a nomogram combining the prediction model and clinical factors was developed.
Our study established a nine-GRG risk model and nomogram to better predict OS in patients with OV. The risk model represents a promising and independent prognostic predictor for patients with OV. Moreover, our study on GRGs could offer guidance for the elucidation of underlying mechanisms in future studies.
卵巢癌(OV)被认为是女性中最致命的妇科癌症。本研究旨在构建一种有效的基因预后模型,以预测 OV 患者的总生存期(OS)。
从癌症基因组图谱(TCGA)数据库中提取 OV 患者的糖酵解相关基因(GRG)表达谱和临床数据。进行单因素、多因素和最小绝对收缩和选择算子 Cox 回归分析,并构建基于 GRG 的预后签名。使用训练集和测试集分析签名的预测能力。
基于九个 GRG(ISG20、CITED2、PYGB、IRS2、ANGPTL4、TGFBI、LHX9、PC 和 DDIT4)构建了一个基因风险签名,用于预测 OV 患者的生存结果。该签名在 TCGA 数据集中显示出对 OV,特别是高级别 OV 的良好预后能力,3 年和 5 年的 AUC 分别为 0.709 和 0.762。在测试集中也得到了类似的结果,联合测试集中 3 年、5 年 OS 的 AUC 分别为 0.714 和 0.772。并且我们的签名是一个独立的预后因素。此外,还开发了一个结合预测模型和临床因素的列线图。
本研究建立了一个由九个 GRG 组成的风险模型和列线图,以更好地预测 OV 患者的 OS。该风险模型代表了一种有前途的独立预后预测因子,可用于 OV 患者。此外,我们对 GRG 的研究可为未来研究阐明潜在机制提供指导。