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即时检测一体化分子诊断设备在传染病诊断中的应用

Integrated Point-of-Care Molecular Diagnostic Devices for Infectious Diseases.

机构信息

Renal Division and Division of Engineering in Medicine, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston 02115, Massachusetts, United States.

Department of Bioengineering, Department of Electrical Engineering and Computer Science, University of California at Berkeley, Berkeley 94720, California, United States.

出版信息

Acc Chem Res. 2021 Nov 16;54(22):4107-4119. doi: 10.1021/acs.accounts.1c00385. Epub 2021 Oct 26.

DOI:10.1021/acs.accounts.1c00385
PMID:34699183
Abstract

The global outbreaks of deadly infectious diseases caused by pathogenic microorganisms have threatened public health worldwide and significantly motivated scientists to satisfy an urgent need for a rapid and accurate detection of pathogens. Traditionally, the culture-based technique is considered as the gold standard for pathogen detection, yet it has a long turnaround time due to the overnight culturing and pathogen isolation. Alternatively, nucleic acid amplification tests provide a relatively shorter turnaround time to identify whether pathogens exist in individuals with high sensitivity and high specificity. In most cases, nucleic acid amplification tests undergo three steps: sample preparation, nucleic acid amplification, and signal transduction. Despite the explosive advancement in nucleic acid amplification and signal transduction technologies, the complex and labor-intensive sample preparation steps remain a bottleneck to create a transformative integrated point-of-care (POC) molecular diagnostic device. Researchers have attempted to simplify and integrate the sample preparations for nucleic acid-based molecular diagnostic devices with innovative progress in integration strategies, engineered materials, reagent storages, and fluid actuation. Therefore, understanding the know-how and obtaining truthful knowledge of existing integrated POC molecular diagnostic devices comprising sample preparations, nucleic acid amplification, and signal transduction can generate innovative solutions to achieve personalized precision medicine and improve global health.In this Account, we discuss the challenges of automated sample preparation solutions integrated with nucleic acid amplification and signal transduction for rapid and precise home diagnostics. Blood, nasal swab, saliva, urine, and stool are emphasized as the most commonly used clinical samples for integrated POC molecular diagnostics of infectious diseases. Even though these five types of samples possess relatively correlated biomarkers due to the human body's circulatory system, each shows unique properties and exclusive advantages for molecular diagnostics in specific situations, which are included in this Account. We examine different integrated POC devices for sample preparation, which includes pathogen isolation and enrichment from the crude sample and nucleic acid purification from isolated pathogens. We present the promising on-chip integration approaches for nucleic acid amplification. We also investigate the on-chip integration methods for reagent storage, which is crucial to simplify the manual operation for end-users. Finally, we present several integrated POC molecular diagnostic devices for infectious diseases. The integrated sample preparation and nucleic acid amplification approach reviewed here can potentially impact the next generation of POC molecular home diagnostic chips, which will significantly impact public health, emergency medicine, and global biosecurity.

摘要

全球范围内由致病微生物引起的致命性传染病爆发,对全球公共卫生构成了威胁,促使科学家迫切需要快速、准确地检测病原体。传统上,基于培养的技术被认为是病原体检测的金标准,但由于需要过夜培养和病原体分离,其检测周期较长。相比之下,核酸扩增检测具有较高的灵敏度和特异性,可以相对较快地确定个体是否存在病原体。在大多数情况下,核酸扩增检测需要经历三个步骤:样本制备、核酸扩增和信号转导。尽管核酸扩增和信号转导技术取得了飞速发展,但复杂且劳动密集型的样本制备步骤仍是创建变革性即时检测(POC)分子诊断设备的瓶颈。研究人员尝试通过创新的集成策略、工程材料、试剂储存和流体驱动来简化和集成基于核酸的分子诊断设备的样本制备。因此,了解现有集成 POC 分子诊断设备中样本制备、核酸扩增和信号转导的专业知识和真实信息,可以为实现个性化精准医学和改善全球健康提供创新解决方案。

本综述讨论了自动化样本制备解决方案与核酸扩增和信号转导集成,用于快速、准确的家庭诊断所面临的挑战。重点介绍了血液、鼻腔拭子、唾液、尿液和粪便作为传染病集成 POC 分子诊断最常用的临床样本。尽管这五种类型的样本由于人体的循环系统而具有相对相关的生物标志物,但每种样本在特定情况下都具有独特的性质和用于分子诊断的独特优势,这些优势都包含在本综述中。我们研究了不同的集成 POC 设备用于样本制备,包括从粗样本中分离和富集病原体以及从分离的病原体中纯化核酸。我们提出了有前途的用于核酸扩增的芯片内集成方法。我们还研究了用于试剂储存的芯片内集成方法,这对于简化终端用户的手动操作至关重要。最后,我们介绍了几种用于传染病的集成 POC 分子诊断设备。本综述中回顾的集成样本制备和核酸扩增方法有可能对下一代 POC 分子家用诊断芯片产生影响,这将对公共卫生、急诊医学和全球生物安全产生重大影响。

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