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通过转录激活进行神经元细胞类型工程

Neuronal Cell-type Engineering by Transcriptional Activation.

作者信息

Liu Songlei, Striebel Johannes, Pasquini Giovanni, Ng Alex H M, Khoshakhlagh Parastoo, Church George M, Busskamp Volker

机构信息

Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA, United States.

Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, United States.

出版信息

Front Genome Ed. 2021 Sep 1;3:715697. doi: 10.3389/fgeed.2021.715697. eCollection 2021.

DOI:10.3389/fgeed.2021.715697
PMID:34713262
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8525383/
Abstract

Gene activation with the CRISPR-Cas system has great implications in studying gene function, controlling cellular behavior, and modulating disease progression. In this review, we survey recent studies on targeted gene activation and multiplexed screening for inducing neuronal differentiation using CRISPR-Cas transcriptional activation (CRISPRa) and open reading frame (ORF) expression. Critical technical parameters of CRISPRa and ORF-based strategies for neuronal programming are presented and discussed. In addition, recent progress on applications of CRISPRa to the nervous system are highlighted. Overall, CRISPRa represents a valuable addition to the experimental toolbox for neuronal cell-type programming.

摘要

利用CRISPR-Cas系统进行基因激活在研究基因功能、控制细胞行为以及调节疾病进展方面具有重大意义。在本综述中,我们调查了近期有关使用CRISPR-Cas转录激活(CRISPRa)和开放阅读框(ORF)表达进行靶向基因激活和多重筛选以诱导神经元分化的研究。介绍并讨论了基于CRISPRa和ORF的神经元编程策略的关键技术参数。此外,还重点介绍了CRISPRa在神经系统应用方面的最新进展。总体而言,CRISPRa是神经元细胞类型编程实验工具箱中的一项有价值的补充。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/8ad34f6e1dd9/fgeed-03-715697-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/e5c476d99175/fgeed-03-715697-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/3010e2ae63a3/fgeed-03-715697-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/8ad34f6e1dd9/fgeed-03-715697-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/e5c476d99175/fgeed-03-715697-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/3010e2ae63a3/fgeed-03-715697-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b85/8525383/8ad34f6e1dd9/fgeed-03-715697-g003.jpg

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本文引用的文献

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The iNs and Outs of Direct Reprogramming to Induced Neurons.直接重编程为诱导神经元的来龙去脉
Front Genome Ed. 2020 Sep 4;2:7. doi: 10.3389/fgeed.2020.00007. eCollection 2020.
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Enhanced Cas12a multi-gene regulation using a CRISPR array separator.利用 CRISPR 阵列分隔器增强 Cas12a 多基因调控
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Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing.基于 CRISPR 的表观基因组编辑实现全基因组可编程转录记忆。
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A Survey of Transcription Factors in Cell Fate Control.细胞命运控制中的转录因子研究综述。
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Regulation of Gene Expression and the Elucidative Role of CRISPR-Based Epigenetic Modifiers and CRISPR-Induced Chromosome Conformational Changes.基因表达调控与基于 CRISPR 的表观遗传修饰物和 CRISPR 诱导的染色体构象变化的解析作用。
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Automated methods for cell type annotation on scRNA-seq data.单细胞RNA测序(scRNA-seq)数据细胞类型注释的自动化方法。
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Cell Rep. 2020 Dec 1;33(9):108460. doi: 10.1016/j.celrep.2020.108460.
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A comprehensive library of human transcription factors for cell fate engineering.人类转录因子细胞命运工程综合文库。
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