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The promoter proximal region in the virD locus of Agrobacterium tumefaciens is necessary for the plant-inducible circularization of T-DNA.

作者信息

Yamamoto A, Iwahashi M, Yanofsky M F, Nester E W, Takebe I, Machida Y

出版信息

Mol Gen Genet. 1987 Jan;206(1):174-7. doi: 10.1007/BF00326554.

DOI:10.1007/BF00326554
PMID:3472033
Abstract

The formation of crown gall tumours involves the transfer of the T-DNA region of the Ti plasmid from Agrobacterium to plant cells and its subsequent integration into plant chromosomes. When agrobacteria are incubated with plant protoplasts or exudates of plants, the T-DNA region is circularized by recombination or cleavage and rejoining between the 25 bp terminal repeats; the formation of circular T-DNAs is thought to be one step in T-DNA transfer (Koukolikova-Nicola et al. 1985; Machida et al. 1986). We previously showed that the virulence region of the Ti plasmid is required for T-DNA circularization. In the present paper, we examined the circularization event in agrobacteria harbouring octopine Ti plasmids with mutations in various loci of the virulence region. The results clearly demonstrate that the gene(s) encoded in the virD locus are necessary for T-DNA circularization. In particular, the gene(s) present in the region proximal to the virD promoter are essential. We propose that product(s) of this gene have recombinase or endonuclease activity which specifically recognizes the 25 bp terminal repeats of T-DNA.

摘要

相似文献

1
The promoter proximal region in the virD locus of Agrobacterium tumefaciens is necessary for the plant-inducible circularization of T-DNA.
Mol Gen Genet. 1987 Jan;206(1):174-7. doi: 10.1007/BF00326554.
2
Virulence genes, borders, and overdrive generate single-stranded T-DNA molecules from the A6 Ti plasmid of Agrobacterium tumefaciens.毒力基因、边界和超速驱动从根癌土壤杆菌的A6 Ti质粒产生单链T-DNA分子。
J Bacteriol. 1988 Apr;170(4):1523-32. doi: 10.1128/jb.170.4.1523-1532.1988.
3
Double-stranded cleavage of T-DNA and generation of single-stranded T-DNA molecules in Escherichia coli by a virD-encoded border-specific endonuclease from Agrobacterium tumefaciens.根癌土壤杆菌中由virD编码的边界特异性核酸内切酶在大肠杆菌中对T-DNA进行双链切割并生成单链T-DNA分子。
J Bacteriol. 1987 Nov;169(11):5035-45. doi: 10.1128/jb.169.11.5035-5045.1987.
4
Plant-inducible virulence promoter of the Agrobacterium tumefaciens Ti plasmid.根癌土壤杆菌Ti质粒的植物诱导型毒力启动子。
Nature. 1984;312(5994):564-6. doi: 10.1038/312564a0.
5
Overexpression of virD1 and virD2 genes in Agrobacterium tumefaciens enhances T-complex formation and plant transformation.根癌土壤杆菌中virD1和virD2基因的过表达增强了T复合体的形成及植物转化。
J Bacteriol. 1990 Aug;172(8):4432-40. doi: 10.1128/jb.172.8.4432-4440.1990.
6
The interaction of Agrobacterium Ti-plasmid DNA and plant cells.农杆菌Ti质粒DNA与植物细胞的相互作用。
Proc R Soc Lond B Biol Sci. 1980 Nov 19;210(1180):351-65. doi: 10.1098/rspb.1980.0139.
7
VirD2 gene product from the nopaline plasmid pTiC58 has at least two activities required for virulence.来自胭脂碱型质粒pTiC58的VirD2基因产物具有毒力所需的至少两种活性。
Nucleic Acids Res. 1990 Dec 11;18(23):6953-8. doi: 10.1093/nar/18.23.6953.
8
Transfer, maintenance, and expression of bacterial Ti-plasmid DNA in plant cells transformed with A. tumefaciens.根癌土壤杆菌转化的植物细胞中细菌Ti质粒DNA的转移、维持及表达。
Brookhaven Symp Biol. 1977(29):36-49.
9
Dual control of Agrobacterium tumefaciens Ti plasmid virulence genes.根癌土壤杆菌Ti质粒毒性基因的双重控制
J Bacteriol. 1987 Nov;169(11):5113-8. doi: 10.1128/jb.169.11.5113-5118.1987.
10
Absence in monocotyledonous plants of the diffusible plant factors inducing T-DNA circularization and vir gene expression in Agrobacterium.单子叶植物中缺乏可扩散的植物因子,这些因子可诱导农杆菌中的T-DNA环化和vir基因表达。
Mol Gen Genet. 1987 Sep;209(2):221-6. doi: 10.1007/BF00329646.

引用本文的文献

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Basal leakage in oscillation: Coupled transcriptional and translational control using feed-forward loops.振荡中的基础渗漏:使用前馈回路进行转录和翻译的耦合控制。
PLoS Comput Biol. 2020 Sep 3;16(9):e1007740. doi: 10.1371/journal.pcbi.1007740. eCollection 2020 Sep.
2
Analysis of TR-DNA/plant junctions in the genome of a Convolvulus arvensis clone transformed by Agrobacterium rhizogenes strain A4.分析农杆菌 A4 菌株转化的旋花基因组中的 TR-DNA/植物 junctions。
Plant Mol Biol. 1989 Jan;12(1):75-85. doi: 10.1007/BF00017449.
3
Right-border sequences enable the left border of an Agrobacterium tumefaciens nopaline Ti-plasmid to produce single-stranded DNA.

本文引用的文献

1
Transfer of Agrobacterium DNA to Plants Requires a T-DNA Border But Not the virE Locus.农杆菌 DNA 向植物的转移需要 T-DNA 边界但不需要 virE 基因座。
Science. 1986 Feb 14;231(4739):725-7. doi: 10.1126/science.231.4739.725.
2
A plant cell factor induces Agrobacterium tumefaciens vir gene expression.一种植物细胞因子诱导根癌农杆菌 vir 基因表达。
Proc Natl Acad Sci U S A. 1986 Jan;83(2):379-83. doi: 10.1073/pnas.83.2.379.
3
Identification of a cloned cytokinin biosynthetic gene.克隆细胞分裂素生物合成基因的鉴定。
右侧边界序列使农杆菌胭脂碱 Ti 质粒的左边界能够产生单链 DNA。
Plant Mol Biol. 1988 Jul;11(4):389-99. doi: 10.1007/BF00039019.
4
Absence in monocotyledonous plants of the diffusible plant factors inducing T-DNA circularization and vir gene expression in Agrobacterium.单子叶植物中缺乏可扩散的植物因子,这些因子可诱导农杆菌中的T-DNA环化和vir基因表达。
Mol Gen Genet. 1987 Sep;209(2):221-6. doi: 10.1007/BF00329646.
5
Factor inducing Agrobacterium tumefaciens vir gene expression is present in monocotyledonous plants.诱导根癌农杆菌 vir 基因表达的因子存在于单子叶植物中。
Proc Natl Acad Sci U S A. 1988 Jun;85(11):3748-52. doi: 10.1073/pnas.85.11.3748.
6
Virulence genes A, G, and D mediate the double-stranded border cleavage of T-DNA from the Agrobacterium Ti plasmid.毒力基因 A、G 和 D 介导农杆菌 Ti 质粒 T-DNA 的双链边界切割。
Proc Natl Acad Sci U S A. 1987 Apr;84(7):1881-5. doi: 10.1073/pnas.84.7.1881.
7
Molecular characterization of the virD operon from Agrobacterium tumefaciens.根癌土壤杆菌virD操纵子的分子特征分析
Nucleic Acids Res. 1987 Sep 25;15(18):7503-17. doi: 10.1093/nar/15.18.7503.
8
Right-hand border regions of octopine T-DNA are recognized by RNA polymerase of Agrobacterium as well as by VirD1 and VirD2 proteins.章鱼碱T-DNA的右手边界区域可被农杆菌的RNA聚合酶以及VirD1和VirD2蛋白识别。
Nucleic Acids Res. 1988 Aug 11;16(15):7647-61. doi: 10.1093/nar/16.15.7647.
9
Organization and characterization of the virCD genes from Agrobacterium rhizogenes.
Mol Gen Genet. 1988 Aug;213(2-3):229-37. doi: 10.1007/BF00339586.
10
The Agrobacterium tumefaciens virE2 gene product is a single-stranded-DNA-binding protein that associates with T-DNA.根癌农杆菌virE2基因产物是一种与T-DNA相关的单链DNA结合蛋白。
J Bacteriol. 1988 Jun;170(6):2659-67. doi: 10.1128/jb.170.6.2659-2667.1988.
Proc Natl Acad Sci U S A. 1984 Aug;81(15):4776-80. doi: 10.1073/pnas.81.15.4776.
4
Cytokinin/auxin balance in crown gall tumors is regulated by specific loci in the T-DNA.冠瘿瘤中的细胞分裂素/生长素平衡受 T-DNA 中特定基因座的调节。
Proc Natl Acad Sci U S A. 1983 Jan;80(2):407-11. doi: 10.1073/pnas.80.2.407.
5
Short direct repeats flank the T-DNA on a nopaline Ti plasmid.短直接重复序列侧翼在胭脂碱 Ti 质粒上的 T-DNA。
Proc Natl Acad Sci U S A. 1982 Oct;79(20):6322-6. doi: 10.1073/pnas.79.20.6322.
6
A 3.6-kbp segment from the vir region of Ti plasmids contains genes responsible for border-sequence-directed production of T region circles in E. coli.来自Ti质粒vir区域的一个3.6千碱基对片段包含负责在大肠杆菌中进行边界序列导向的T区域环产生的基因。
EMBO J. 1986 Jun;5(6):1129-35. doi: 10.1002/j.1460-2075.1986.tb04337.x.
7
DNA from the A6S/2 crown gall tumor contains scrambled Ti-plasmid sequences near its junctions with plant DNA.来自A6S/2冠瘿瘤的DNA在其与植物DNA的连接处附近含有混乱的Ti质粒序列。
Cell. 1982 Jul;29(3):1005-14. doi: 10.1016/0092-8674(82)90464-0.
8
Tumor induction by Agrobacterium tumefaciens: analysis of the boundaries of T-DNA.根癌土壤杆菌诱导肿瘤:T-DNA边界分析
J Mol Appl Genet. 1982;1(4):361-70.
9
Complementation analysis of Agrobacterium tumefaciens Ti plasmid mutations affecting oncogenicity.根癌土壤杆菌Ti质粒影响致癌性的突变体的互补分析。
J Bacteriol. 1982 Apr;150(1):327-31. doi: 10.1128/jb.150.1.327-331.1982.
10
Genetic analysis of T-DNA transcripts in nopaline crown galls.胭脂碱冠瘿瘤中T-DNA转录本的遗传分析。
Cell. 1983 Apr;32(4):1057-67. doi: 10.1016/0092-8674(83)90290-8.