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基于质谱的技术和工作流程用于研究真菌内生菌来源生物活性化合物的化学。

Mass Spectrometry-Based Technology and Workflows for Studying the Chemistry of Fungal Endophyte Derived Bioactive Compounds.

机构信息

Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi-221005, India.

Department of Pharmacology, Institute of Medical Sciences, Banaras Hindu University, Varanasi-221005, India.

出版信息

ACS Chem Biol. 2021 Nov 19;16(11):2068-2086. doi: 10.1021/acschembio.1c00581. Epub 2021 Nov 1.

Abstract

Bioactive compounds have gained substantial attention in research and have conferred great advancements in the industrial and pharmacological fields. Highly diverse fungi and their metabolome serve as a big platform to be explored for their diverse bioactive compounds. Omics tools coupled with bioinformatics, statistical, and well-developed algorithm tools have elucidated immense knowledge about fungal endophyte derived bioactive compounds. Further, these compounds are subjected to chromatography-gas chromatography and liquid chromatography (LC), spectroscopy-nuclear magnetic resonance (NMR), and "soft ionization" technique-matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) based analytical techniques for structural characterization. The mass spectrometry (MS)-based approach, being highly sensitive, reproducible, and reliable, produces quick and high-profile identification. Coupling these techniques with MS has resulted in a descriptive account of the identification and quantification of fungal endophyte derived bioactive compounds. This paper emphasizes the workflows of the above-mentioned techniques, their advancement, and future directions to study the unraveled area of chemistry of fungal endophyte-derived bioactive compounds.

摘要

生物活性化合物在研究中受到了广泛关注,并为工业和药理学领域带来了重大进展。高度多样化的真菌及其代谢组是探索其多样化生物活性化合物的重要平台。组学工具与生物信息学、统计学和完善的算法工具相结合,阐明了大量关于真菌内生菌衍生生物活性化合物的知识。此外,这些化合物还经过色谱-气相色谱和液相色谱 (LC)、光谱-核磁共振 (NMR) 和“软电离”技术-基质辅助激光解吸/电离-飞行时间 (MALDI-TOF) 基于分析技术进行结构表征。基于质谱 (MS) 的方法具有高度灵敏、重现性和可靠性,可快速、高效地进行鉴定。将这些技术与 MS 相结合,对真菌内生菌衍生生物活性化合物的鉴定和定量进行了描述性说明。本文强调了上述技术的工作流程、它们的进展以及未来的方向,以研究真菌内生菌衍生生物活性化合物化学领域的未解之谜。

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