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在非应激条件下,高表达 Phasin 和调控基因促进铜绿假单胞菌 H16 合成聚羟基丁酸酯。

The Overexpression of Phasin and Regulator Genes Promoting the Synthesis of Polyhydroxybutyrate in Cupriavidus necator H16 under Nonstress Conditions.

机构信息

National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciencesgrid.9227.e, Beijing, China.

School of Chemical Engineering, University of Chinese Academy of Sciencesgrid.9227.e, Beijing, China.

出版信息

Appl Environ Microbiol. 2022 Jan 25;88(2):e0145821. doi: 10.1128/AEM.01458-21. Epub 2021 Nov 3.

Abstract

Cupriavidus necator H16 is an ideal strain for polyhydroxybutyrate (PHB) production from CO. Low-oxygen stress can induce PHB synthesis in C. necator H16 while reducing bacterial growth under chemoautotrophic culture. The optimum growth and PHB synthesis of C. necator H16 cannot be achieved simultaneously, which restricts PHB production. The present study was initiated to address the issue through comparative transcriptome and gene function analysis. First, the comparative transcriptome of C. necator H16 chemoautotrophically cultured under low-oxygen stress and nonstress conditions was studied. Three types of genes were discovered to have differential levels of transcription: those involving PHB enzymatic synthesis, PHB granulation, and regulators. Under low-oxygen stress conditions, acetoacetyl-coenzyme A (CoA) reductase gene , PHB synthase gene , phasins genes and , and regulator genes and were upregulated 3.0-, 2.5-, 1.8-, 2.7-, 3.5-, and 1.6-fold, respectively. Second, the functions of upregulated genes and their applications in PHB synthesis were further studied. It was found that the overexpression of , , , and can induce PHB synthesis under nonstress conditions, while and have no significant effect. Under the optimum conditions, the PHB percentage content in C. necator H16 was increased by 37.2%, 28.4%, 15.8%, and 41.0%, respectively, with overexpression of , , , and , and the corresponding PHB production increased by 49.8%, 42.9%, 47.0%, and 77.5%, respectively, under nonstress chemoautotrophic conditions. Similar promotion by , , , and was observed in heterotrophically cultured C. necator H16. The PHB percentage content and PHB production were increased by 54.4% and 103.1%, respectively, with the overexpression of under nonstress heterotrophic conditions. Microbial fixation of CO is an effective way to reduce greenhouse gases. Some microbes, such as C. necator H16, usually accumulate PHB when they grow under stress. Low-oxygen stress can induce PHB synthesis when C. necator H16 is autotrophically cultured with CO, H, and O, while under stress, growth is restricted, and total PHB yield is reduced. Achieving the optimal bacterial growth and PHB synthesis at the same time is an ideal condition for transforming CO into PHB by C. necator H16. The present study was initiated to clarify the molecular basis of low-oxygen stress promoting PHB accumulation and to realize the optimal PHB production by C. necator H16. Genes upregulated under nonstress conditions were identified through comparative transcriptome analysis and overexpression of phasin, and regulator genes were demonstrated to promote PHB synthesis in C. necator H16.

摘要

铜绿假单胞菌 H16 是一种从 CO 生产聚羟基丁酸酯 (PHB) 的理想菌株。低氧应激可以诱导 C. necator H16 中的 PHB 合成,同时在化自养培养下降低细菌生长。铜绿假单胞菌 H16 的最佳生长和 PHB 合成不能同时实现,这限制了 PHB 的生产。本研究旨在通过比较转录组和基因功能分析来解决这个问题。首先,研究了铜绿假单胞菌 H16 在低氧应激和非应激条件下化自养培养的比较转录组。发现了三种转录水平不同的基因:涉及 PHB 酶合成、PHB 颗粒化和调节剂的基因。在低氧应激条件下,乙酰乙酰辅酶 A (CoA) 还原酶基因、PHB 合酶基因、phasins 基因和调节剂基因和分别上调了 3.0、2.5、1.8、2.7、3.5 和 1.6 倍。其次,进一步研究了上调基因的功能及其在 PHB 合成中的应用。结果发现,过表达、、、和可以在非应激条件下诱导 PHB 合成,而和则没有显著影响。在最佳条件下,通过过表达、、、和,铜绿假单胞菌 H16 中的 PHB 百分比含量分别增加了 37.2%、28.4%、15.8%和 41.0%,相应的 PHB 产量分别增加了 49.8%、42.9%、47.0%和 77.5%,在非应激化自养条件下。在异养培养的铜绿假单胞菌 H16 中也观察到了类似的促进作用。通过过表达,在非应激异养条件下,PHB 百分比含量和 PHB 产量分别增加了 54.4%和 103.1%。CO 的微生物固定是减少温室气体的有效方法。一些微生物,如铜绿假单胞菌 H16,通常在应激下生长时会积累 PHB。当铜绿假单胞菌 H16 在化自养条件下用 CO、H 和 O 培养时,低氧应激可以诱导 PHB 合成,而在应激下,生长受到限制,总 PHB 产量降低。铜绿假单胞菌 H16 将 CO 转化为 PHB 的理想条件是同时实现最佳细菌生长和 PHB 合成。本研究旨在阐明低氧应激促进 PHB 积累的分子基础,并实现铜绿假单胞菌 H16 的最佳 PHB 产量。通过比较转录组分析鉴定了非应激条件下上调的基因,并证明了 phasin 和调节剂基因的过表达可以促进铜绿假单胞菌 H16 中的 PHB 合成。

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