文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

Identification of ABCC5 Among ATP-Binding Cassette Transporter Family as a New Biomarker for Hepatocellular Carcinoma Based on Bioinformatics Analysis.

作者信息

Qiu Yuting, Li Haobo, Xie Jiaheng, Qiao Xinwei, Wu Jing

机构信息

Department of Gastroenterology, Beijing Friendship Hospital, Capital Medical University, National Clinical Research Centre for Digestive Diseases, Beijing, 100050, People's Republic of China.

Department of Pulmonary and Critical Care Medicine, China-Japan Friendship Hospital; Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, 100029, People's Republic of China.

出版信息

Int J Gen Med. 2021 Oct 27;14:7235-7246. doi: 10.2147/IJGM.S333904. eCollection 2021.


DOI:10.2147/IJGM.S333904
PMID:34737618
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8560065/
Abstract

PURPOSE: Liver cancer is the fifth most common type of cancer worldwide, and the ATP-binding cassette (ABC) transporter family has been widely accepted as a cause of multidrug resistance. This study was conducted to explore the potential value and mechanisms of the ABC transporter gene family in the liver hepatocellular carcinoma (LIHC). MATERIALS AND METHODS: Data were collected from different public databases. UALCAN, ONCOMINE, and GEPIA were used to retrieve a selection of differently expressed and pathological stage-related genes among the ABC family. Principal component analysis (PCA) was utilized for grouping, and its prognostic value was evaluated by univariate and multivariate Cox analyses. The co-expression pattern was constructed with UALCAN, and the functional analyses were carried out with DAVID. The correlation between the biomarker and immune infiltration, genetic alteration frequency, and drug sensitivity were explored with TIMER, cBioPortal, GDSC and CTRP, respectively. Finally, tSNE algorithm was used to explore the distribution of ABCC5 expressed cells. RESULTS: Among the ABC transporter family members, ABCC5 was differently expressed and strongly related to the pathological stage of LIHC. PCA divided patients of LIHC into two groups, and Cox analyses demonstrated that ABCC5 was an independent risk factor of LIHC. Functional analyses indicated that the genes were enriched in the pathways of transmembrane transporter, ATPase activity, and bile secretion. ABCC5 is also associated with immune infiltration of cells like macrophages, neutrophils, and dendritic cells. The genetic alteration frequency of ABCC5 confirmed its potential value in LIHC. In addition, several drugs were explored and found to be relevant to LIHC. The t-SNE showed that expression of ABCC5 was most concentrated in macrophages, followed by hepatocytes. CONCLUSION: ABCC5 may facilitate LIHC progression through different mechanisms and be a potential biomarker and target for diagnosis, prognosis, and therapy of LIHC.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/1e71387e8340/IJGM-14-7235-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/2c0427770835/IJGM-14-7235-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/a455bad48376/IJGM-14-7235-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/41ee1ff002d0/IJGM-14-7235-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/a125f90858af/IJGM-14-7235-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/97afe217dedb/IJGM-14-7235-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/f2d5e29dd434/IJGM-14-7235-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/1e71387e8340/IJGM-14-7235-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/2c0427770835/IJGM-14-7235-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/a455bad48376/IJGM-14-7235-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/41ee1ff002d0/IJGM-14-7235-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/a125f90858af/IJGM-14-7235-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/97afe217dedb/IJGM-14-7235-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/f2d5e29dd434/IJGM-14-7235-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dec/8560065/1e71387e8340/IJGM-14-7235-g0007.jpg

相似文献

[1]
Identification of ABCC5 Among ATP-Binding Cassette Transporter Family as a New Biomarker for Hepatocellular Carcinoma Based on Bioinformatics Analysis.

Int J Gen Med. 2021-10-27

[2]
Adenosine triphosphate-binding cassette subfamily C members in liver hepatocellular carcinoma: Bioinformatics-driven prognostic value.

Medicine (Baltimore). 2022-2-18

[3]
Prognostic value and immunological role of BAIAP2L2 in liver hepatocellular carcinoma: A pan-cancer analysis.

Front Surg. 2022-10-21

[4]
Systematic Analyses of the Role of the Reader Protein of -Methyladenosine RNA Methylation, YTH Domain Family 2, in Liver Hepatocellular Carcinoma.

Front Mol Biosci. 2020-12-2

[5]
Identification of Therapeutic Targets and Prognostic Biomarkers Among Chemokine (C-C Motif) Ligands in the Liver Hepatocellular Carcinoma Microenvironment.

Front Cell Dev Biol. 2021-12-6

[6]
The Prognostic Significance of and Its Related Immune Infiltration in Liver Hepatocellular Carcinoma.

Int J Mol Sci. 2022-10-24

[7]
CD93 overexpresses in liver hepatocellular carcinoma and represents a potential immunotherapy target.

Front Immunol. 2023

[8]
A novel prognostic biomarker: is correlated with methylation and immune escape in liver hepatocellular carcinoma.

Transl Cancer Res. 2023-5-31

[9]
Varied clinical significance of ATP-binding cassette C sub-family members for lung adenocarcinoma.

Medicine (Baltimore). 2021-4-23

[10]
Identification and Validation of DEPDC1B as an Independent Early Diagnostic and Prognostic Biomarker in Liver Hepatocellular Carcinoma.

Front Genet. 2022-1-13

引用本文的文献

[1]
To explore the prognostic efficacy and mechanism of ABCC5 clinical scoring model in hepatocellular carcinoma.

Front Oncol. 2025-8-11

[2]
Identification of key biomarker genes in liver hepatocellular carcinoma and kidney renal clear cell carcinoma progression: A shared high-throughput screening and molecular docking method with potentials for targeted therapeutic interventions.

J Genet Eng Biotechnol. 2025-6

[3]
Revisiting ABC Transporters and Their Clinical Significance in Glioblastoma.

Pharmaceuticals (Basel). 2025-1-15

[4]
Study of TRAF3IP3 for prognosis and immune infiltration in hepatocellular carcinoma.

PeerJ. 2024-12-12

[5]
Regulation of ferroptosis by PI3K/Akt signaling pathway: a promising therapeutic axis in cancer.

Front Cell Dev Biol. 2024-3-18

[6]
Prognostic Significance of Glycolysis-Related Genes in Lung Squamous Cell Carcinoma.

Int J Mol Sci. 2024-1-17

[7]
Identification and validation of methylation-CpG prognostic signature for prognosis of hepatocellular carcinoma.

Aging (Albany NY). 2024-1-18

[8]
The role of ATP binding cassette (ABC) transporters in breast cancer: Evaluating prognosis, predicting immunity, and guiding treatment.

Channels (Austin). 2023-12

[9]
Targeting ferroptosis in hepatocellular carcinoma.

Hepatol Int. 2024-2

[10]
Identification of m6A regulator-mediated RNA methylation modification patterns and key immune-related genes involved in atrial fibrillation.

Aging (Albany NY). 2023-2-20

本文引用的文献

[1]
Cancer Statistics, 2021.

CA Cancer J Clin. 2021-1

[2]
circ_0067934: A Potential Biomarker and Therapeutic Target for Hepatocellular Carcinoma.

Ann Clin Lab Sci. 2020-11

[3]
Dendritic Cell and T Cell Crosstalk in Liver Fibrogenesis and Hepatocarcinogenesis: Implications for Prevention and Therapy of Liver Cancer.

Int J Mol Sci. 2020-10-6

[4]
Pharmacogenomics with red cells: a model to study protein variants of drug transporter genes.

Vox Sang. 2021-2

[5]
ABCB11 deficiency presenting as transient neonatal cholestasis: Correlation with genotypes and BSEP expression.

Liver Int. 2020-11

[6]
Systematic analysis of the ABC transporter family in hepatocellular carcinoma reveals the importance of ABCB6 in regulating ferroptosis.

Life Sci. 2020-7-22

[7]
DCK is a promising prognostic biomarker and correlated with immune infiltrates in hepatocellular carcinoma.

World J Surg Oncol. 2020-7-20

[8]
Biomarkers in Hepatocellular Carcinoma: Diagnosis, Prognosis and Treatment Response Assessment.

Cells. 2020-6-1

[9]
Glycolytic activation of monocytes regulates the accumulation and function of neutrophils in human hepatocellular carcinoma.

J Hepatol. 2020-10

[10]
Dysfunction of ABC transporters at the blood-brain barrier: Role in neurological disorders.

Pharmacol Ther. 2020-9

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索