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微生物能量管理——三种广泛权衡的产物。

Microbial energy management-A product of three broad tradeoffs.

作者信息

McKinlay James B, Cook Gregory M, Hards Kiel

机构信息

Department of Biology, Indiana University, Bloomington, IN, United States.

Department of Microbiology and Immunology, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand; Maurice Wilkins Centre for Molecular Biodiscovery, The University of Auckland, Auckland, New Zealand.

出版信息

Adv Microb Physiol. 2020;77:139-185. doi: 10.1016/bs.ampbs.2020.09.001. Epub 2020 Oct 20.

Abstract

Wherever thermodynamics allows, microbial life has evolved to transform and harness energy. Microbial life thus abounds in the most unexpected places, enabled by profound metabolic diversity. Within this diversity, energy is transformed primarily through variations on a few core mechanisms. Energy is further managed by the physiological processes of cell growth and maintenance that use energy. Some aspects of microbial physiology are streamlined for energetic efficiency while other aspects seem suboptimal or even wasteful. We propose that the energy that a microbe harnesses and devotes to growth and maintenance is a product of three broad tradeoffs: (i) economic, trading enzyme synthesis or operational cost for functional benefit, (ii) environmental, trading optimization for a single environment for adaptability to multiple environments, and (iii) thermodynamic, trading energetic yield for forward metabolic flux. Consideration of these tradeoffs allows one to reconcile features of microbial physiology that seem to opposingly promote either energetic efficiency or waste.

摘要

只要热力学条件允许,微生物就会进化以转化和利用能量。因此,在最意想不到的地方都有微生物的存在,这得益于其丰富的代谢多样性。在这种多样性中,能量主要通过几种核心机制的变体来转化。能量通过细胞生长和维持等利用能量的生理过程进一步得到管理。微生物生理学的某些方面为了提高能量效率而进行了简化,而其他方面则似乎不尽如人意甚至是浪费的。我们认为,微生物用于生长和维持的能量是三种广泛权衡的结果:(i)经济性,以酶合成或运营成本换取功能效益;(ii)环境性,以针对单一环境的优化换取对多种环境的适应性;(iii)热力学性,以能量产量换取正向代谢通量。考虑这些权衡可以使人们协调微生物生理学中看似相互矛盾地促进能量效率或浪费的特征。

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