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在一个菌株中,小DX蛋白对ATP泄漏的代谢调节。

Metabolic adjustments in response to ATP spilling by the small DX protein in a strain.

作者信息

Apel Cécile, Levasseur Marceau, Lejeune Clara, Korch Shaleen B, Guérard Florence, David Michelle, Askora Ahmed, Litaudon Marc, Roussi Fanny, Gakière Bertrand, Chaput John, Virolle Marie-Joelle

机构信息

Département de Chimie des Substances Naturelles et Chimie Médicinale, Institut de Chimie des Substances Naturelles, UPR 2301, Université Paris-Saclay, Centre National de le Recherche Scientifique, Gif-sur-Yvette, France.

Département de Microbiologie, Institute for Integrative Biology of the Cell (I2BC), UMR 9198, Université Paris-Saclay, CEA, Centre National de le Recherche Scientifique, Gif-sur-Yvette, France.

出版信息

Front Cell Dev Biol. 2023 Mar 8;11:1129009. doi: 10.3389/fcell.2023.1129009. eCollection 2023.

Abstract

ATP wasting is recognized as an efficient strategy to enhance metabolic activity and productivity of specific metabolites in several microorganisms However, such strategy has been rarely implemented in species whereas antibiotic production by members of this genus is known to be triggered in condition of phosphate limitation that is correlated with a low ATP content. In consequence, to assess the effects of ATP spilling on the primary and specialized metabolisms of , the gene encoding the small synthetic protein DX, that has high affinity for ATP and dephosphorylates ATP into ADP, was cloned in the integrative vector pOSV10 under the control of the strong E promoter. This construct and the empty vector were introduced into the species yielding A37 and A36, respectively. A37 yielded higher biomass than A36 indicating that the DX-mediated ATP degradation resulted into a stimulation of A37 metabolism, consistently with what was reported in other microorganisms. The comparative analysis of the metabolomes of A36 and A37 revealed that A37 had a lower content in glycolytic and Tricarboxylic Acid Cycle intermediates as well as in amino acids than A36, these metabolites being consumed for biomass generation in A37. In contrast, the abundance of other molecules indicative either of energetic stress (ADP, AMP, UMP, ornithine and thymine), of activation (NAD and threonic acid) or inhibition (citramalic acid, fatty acids, TAG and L-alanine) of the oxidative metabolism, was higher in A37 than in A36. Furthermore, hydroxyl-pyrimidine derivatives and polycyclic aromatic polyketide antibiotics belonging to the angucycline class and thought to have a negative impact on respiration were also more abundantly produced by A37 than by A36. This comparative analysis thus revealed the occurrence in A37 of antagonistic metabolic strategies, namely, activation or slowing down of oxidative metabolism and respiration, to maintain the cellular energetic balance. This study thus demonstrated that DX constitutes an efficient biotechnological tool to enhance the expression of the specialized metabolic pathways present in the genomes that may include cryptic pathways. Its use thus might lead to the discovery of novel bioactive molecules potentially useful to human health.

摘要

ATP消耗被认为是增强几种微生物代谢活性和特定代谢产物产量的有效策略。然而,这种策略在该物种中很少实施,而该属成员的抗生素生产已知在与低ATP含量相关的磷酸盐限制条件下被触发。因此,为了评估ATP泄漏对该物种初级和特殊代谢的影响,编码对ATP具有高亲和力并将ATP去磷酸化为ADP的小合成蛋白DX的基因,在强E启动子的控制下克隆到整合载体pOSV10中。将该构建体和空载体分别导入该物种,产生A37和A36。A37产生的生物量高于A36,表明DX介导的ATP降解导致A37代谢受到刺激,这与其他微生物中的报道一致。对A36和A37代谢组的比较分析表明,A37中糖酵解和三羧酸循环中间体以及氨基酸的含量低于A36,这些代谢产物在A37中被用于生物量的产生。相反,指示氧化代谢的能量应激(ADP、AMP、UMP、鸟氨酸和胸腺嘧啶)、激活(NAD和苏糖酸)或抑制(柠苹酸、脂肪酸、TAG和L-丙氨酸)的其他分子在A37中的丰度高于A36。此外,A37产生的属于安古霉素类且被认为对呼吸有负面影响的羟基嘧啶衍生物和多环芳香聚酮类抗生素也比A36更丰富。因此,这种比较分析揭示了A37中存在拮抗代谢策略,即激活或减缓氧化代谢和呼吸,以维持细胞能量平衡。因此,这项研究表明DX构成了一种有效的生物技术工具,可增强该物种基因组中存在的特殊代谢途径的表达,这些途径可能包括隐秘途径。因此,其使用可能会导致发现对人类健康潜在有用的新型生物活性分子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fcba/10030506/2a0c3caa7bb0/fcell-11-1129009-g001.jpg

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