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蓝藻中核酮糖-1,5-二磷酸羧化酶/加氧酶(RuBisCO)表达及光合放氧量的定量分析

Quantification of RuBisCO Expression and Photosynthetic Oxygen Evolution in Cyanobacteria.

作者信息

Kędzior Mateusz, Kacar Betul

机构信息

Department of Molecular and Cellular Biology, University of Arizona, Tucson, AZ, USA.

Department of Bacteriology, University of Wisconsin-Madison, USA.

出版信息

Bio Protoc. 2021 Oct 20;11(20):e4199. doi: 10.21769/BioProtoc.4199.

DOI:10.21769/BioProtoc.4199
PMID:34761071
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8554809/
Abstract

Phototrophic microorganisms are frequently engineered to regulate the expression and the activity of targeted enzymes of interest for specific biotechnological and agricultural applications. This protocol describes a method to evaluate the expression of RuBisCO (ribulose 1,5-bisphosphate carboxylase/oxygenase) in the model cyanobacterium PCC 7942, at both the transcript and protein levels by quantitative PCR and Western blot, respectively. We further describe an experimental method to determine photosynthetic activity using an oxygen electrode that measures the rate of molecular oxygen production by cyanobacterial cultures. Our protocol can be utilized to assess the effects of RuBisCO engineering at the metabolic and physiological levels.

摘要

光合微生物经常被改造,以调节目标感兴趣酶的表达和活性,用于特定的生物技术和农业应用。本方案描述了一种通过定量PCR和蛋白质印迹分别在转录水平和蛋白质水平评估模型蓝细菌集胞藻PCC 7942中1,5-二磷酸核酮糖羧化酶/加氧酶(RuBisCO)表达的方法。我们还描述了一种使用氧电极测定光合活性的实验方法,该电极可测量蓝细菌培养物产生分子氧的速率。我们的方案可用于评估RuBisCO工程在代谢和生理水平上的影响。

相似文献

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Quantification of RuBisCO Expression and Photosynthetic Oxygen Evolution in Cyanobacteria.蓝藻中核酮糖-1,5-二磷酸羧化酶/加氧酶(RuBisCO)表达及光合放氧量的定量分析
Bio Protoc. 2021 Oct 20;11(20):e4199. doi: 10.21769/BioProtoc.4199.
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Carboxysome Mispositioning Alters Growth, Morphology, and Rubisco Level of the Cyanobacterium Synechococcus elongatus PCC 7942.羧基体定位错误改变了蓝藻集胞藻 PCC 7942 的生长、形态和 Rubisco 水平。
mBio. 2021 Aug 31;12(4):e0269620. doi: 10.1128/mBio.02696-20. Epub 2021 Aug 3.
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Improved Free Fatty Acid Production in Cyanobacteria with Synechococcus sp. PCC 7002 as Host.利用聚球藻 sp. PCC 7002 作为宿主提高蓝细菌中游离脂肪酸的产量。
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Introduction of a synthetic CO₂-fixing photorespiratory bypass into a cyanobacterium.将人工合成的 CO₂固定光呼吸旁路引入一种蓝细菌。
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Rubisco regulation in response to altered carbon status in the cyanobacterium Synechococcus elongatus PCC 7942.响应于蓝细菌集胞藻 PCC 7942 中碳状态改变的 Rubisco 调节。
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Ribulose-1,5-bisphosphate carboxylase/oxygenase from thermophilic cyanobacterium Thermosynechococcus elongatus.来自嗜热蓝细菌嗜热栖热放线菌的1,5-二磷酸核酮糖羧化酶/加氧酶。
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Effects of RuBisCO and CO concentration on cyanobacterial growth and carbon isotope fractionation.Rubisco 和 CO2 浓度对蓝藻生长和碳同位素分馏的影响。
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A faster Rubisco with potential to increase photosynthesis in crops.具有增加作物光合作用潜力的更快 Rubisco。
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引用本文的文献

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Biomedical engineering utilizing living photosynthetic cyanobacteria and microalgae: Current status and future prospects.利用光合蓝细菌和微藻的生物医学工程:现状与未来展望。
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本文引用的文献

1
Effects of RuBisCO and CO concentration on cyanobacterial growth and carbon isotope fractionation.Rubisco 和 CO2 浓度对蓝藻生长和碳同位素分馏的影响。
Geobiology. 2023 May;21(3):390-403. doi: 10.1111/gbi.12543. Epub 2023 Jan 5.
2
The circadian clock and darkness control natural competence in cyanobacteria.生物钟和黑暗控制蓝细菌的自然能力。
Nat Commun. 2020 Apr 3;11(1):1688. doi: 10.1038/s41467-020-15384-9.
3
Increased ethylene production by overexpressing phosphoenolpyruvate carboxylase in the cyanobacterium PCC 6803.通过在蓝细菌PCC 6803中过表达磷酸烯醇式丙酮酸羧化酶提高乙烯产量。
Biotechnol Biofuels. 2020 Jan 28;13:16. doi: 10.1186/s13068-020-1653-y. eCollection 2020.
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Stable Reference Gene Selection for RT-qPCR Analysis in PCC 7942 under Abiotic Stresses.在非生物胁迫下 PCC 7942 中用于 RT-qPCR 分析的稳定参考基因选择。
Biomed Res Int. 2019 Apr 21;2019:7630601. doi: 10.1155/2019/7630601. eCollection 2019.
5
Feeding the world: improving photosynthetic efficiency for sustainable crop production.养活世界:提高光合作用效率以实现可持续作物生产。
J Exp Bot. 2019 Feb 20;70(4):1119-1140. doi: 10.1093/jxb/ery445.
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Synthetic biology approaches for improving photosynthesis.合成生物学方法在提高光合作用中的应用。
J Exp Bot. 2019 Mar 11;70(5):1425-1433. doi: 10.1093/jxb/erz029.
7
Overexpression of Rubisco subunits with RAF1 increases Rubisco content in maize.过表达 RAF1 可增加玉米 Rubisco 大亚基的含量。
Nat Plants. 2018 Oct;4(10):802-810. doi: 10.1038/s41477-018-0252-4. Epub 2018 Oct 1.
8
Overexpression of bifunctional fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase leads to enhanced photosynthesis and global reprogramming of carbon metabolism in Synechococcus sp. PCC 7002.双功能果糖-1,6-二磷酸酶/景天庚酮糖-1,7-二磷酸酶的过表达导致集胞藻 PCC 7002 光合作用增强和碳代谢的全局重编程。
Metab Eng. 2018 May;47:170-183. doi: 10.1016/j.ymben.2018.03.001. Epub 2018 Mar 3.
9
PCC 6803 overexpressing RuBisCO grow faster with increased photosynthesis.过表达核酮糖-1,5-二磷酸羧化酶/加氧酶的集胞藻6803生长更快,光合作用增强。
Metab Eng Commun. 2017 Feb 20;4:29-36. doi: 10.1016/j.meteno.2017.02.002. eCollection 2017 Jun.
10
A short history of RubisCO: the rise and fall (?) of Nature's predominant CO fixing enzyme.RubisCO 的简史:大自然占主导地位的 CO2 固定酶的兴衰(?)。
Curr Opin Biotechnol. 2018 Feb;49:100-107. doi: 10.1016/j.copbio.2017.07.017. Epub 2017 Aug 29.