Imperial College Centre for Synthetic Biology, Imperial College London, London SW7 2AZ, U.K.
Department of Bioengineering, Imperial College London, London SW7 2AZ, U.K.
ACS Synth Biol. 2021 Dec 17;10(12):3422-3434. doi: 10.1021/acssynbio.1c00358. Epub 2021 Nov 12.
Bacteria proficient at producing cellulose are an attractive synthetic biology host for the emerging field of Engineered Living Materials (ELMs). Species from the genus produce high yields of pure cellulose materials in a short time with minimal resources, and pioneering work has shown that genetic engineering in these strains is possible and can be used to modify the material and its production. To accelerate synthetic biology progress in these bacteria, we introduce here the tool kit (KTK), a standardized modular cloning system based on Golden Gate DNA assembly that allows DNA parts to be combined to build complex multigene constructs expressed in bacteria from plasmids. Working in , we describe basic parts for this system, including promoters, fusion tags, and reporter proteins, before showcasing how the assembly system enables more complex designs. Specifically, we use KTK cloning to reformat the curli amyloid fiber system for functional expression in , and go on to modify it as a system for programming protein secretion from the cellulose producing bacteria. With this toolkit, we aim to accelerate modular synthetic biology in these bacteria, and enable more rapid progress in the emerging ELMs community.
擅长生产纤维素的细菌是新兴的工程活材料(ELMs)领域中极具吸引力的合成生物学宿主。该属的物种能够在短时间内以最小的资源量产生高产量的纯纤维素材料,开创性的工作表明,这些菌株中的基因工程是可行的,并可用于修饰材料及其生产。为了加速这些细菌中的合成生物学进展,我们在这里引入了工具包(KTK),这是一个基于 Golden Gate DNA 组装的标准化模块化克隆系统,允许将 DNA 片段组合在一起,以构建在细菌中从质粒表达的复杂多基因构建体。我们在 中工作,首先描述了该系统的基本部分,包括启动子、融合标签和报告蛋白,然后展示了组装系统如何实现更复杂的设计。具体来说,我们使用 KTK 克隆将 curli 淀粉样纤维系统重新格式化,以便在 中进行功能表达,并继续将其修改为纤维素产生细菌中编程蛋白质分泌的系统。有了这个工具包,我们旨在加速这些细菌中的模块化合成生物学,并使新兴的 ELMs 社区取得更快的进展。