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基于转录组的有机磷农药稻瘟灵响应基因鉴定。

Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in .

机构信息

Toxicity and Risk Assessment Division, Department of Agro-Food Safety and Crop Protection, National Institute of Agricultural Sciences, Rural Development Administration, Wanju-gun 55365, Korea.

出版信息

Genes (Basel). 2021 Oct 29;12(11):1738. doi: 10.3390/genes12111738.

Abstract

Organophosphate pesticides (OPPs) are one of the most widely used insecticides. OPPs exert their neurotoxic effects by inhibiting acetylcholine esterase (AChE). Most of the gross developmental abnormalities observed in OPP-treated fish, on the other hand, may not be explained solely by AChE inhibition. To understand the overall molecular mechanisms involved in OPP toxicity, we used the zebrafish (ZF) model. We exposed ZF embryos to an OPP, phosmet, for 96 h, and then analyzed developmental abnormalities and performed whole transcriptome analysis. Phenotypic abnormalities, such as bradycardia, spine curvature, and growth retardation, were observed in phosmet-treated ZF (PTZF). Whole transcriptome analysis revealed 2190 differentially expressed genes (DEGs), with 822 and 1368 significantly up-and downregulated genes, respectively. System process and sensory and visual perception were among the top biological pathways affected by phosmet toxicity. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed significant enrichment of metabolic pathways, calcium signaling pathway, regulation of actin cytoskeleton, cardiac muscle contraction, drug metabolism-other enzymes, and phototransduction. Quantitative real-time PCR results of six DEGs agreed with the sequencing data expression profile trend. Our findings provide insights into the consequences of phosmet exposure in ZF, as well as an estimate of the potential risk of OPPs to off-target species.

摘要

有机磷农药(OPPs)是最广泛使用的杀虫剂之一。OPPs 通过抑制乙酰胆碱酯酶(AChE)发挥其神经毒性作用。另一方面,在 OPP 处理的鱼类中观察到的大多数明显的发育异常可能不仅仅是由于 AChE 抑制引起的。为了了解 OPP 毒性所涉及的整体分子机制,我们使用了斑马鱼(ZF)模型。我们将 ZF 胚胎暴露于 OPP 之一的 phosmet 中 96 小时,然后分析发育异常并进行全转录组分析。在 phosmet 处理的 ZF(PTZF)中观察到表型异常,如心动过缓、脊柱弯曲和生长迟缓。全转录组分析显示有 2190 个差异表达基因(DEGs),分别有 822 个和 1368 个基因显著上调和下调。系统过程和感官及视觉感知是受 phosmet 毒性影响的顶级生物学途径之一。京都基因与基因组百科全书(KEGG)途径分析显示代谢途径、钙信号通路、肌动蛋白细胞骨架调节、心肌收缩、药物代谢-其他酶和光转导显著富集。六个 DEGs 的定量实时 PCR 结果与测序数据表达谱趋势一致。我们的研究结果提供了关于 phosmet 暴露对 ZF 的后果的深入了解,以及对 OPPs 对非靶标物种的潜在风险的估计。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fa0/8624534/a43ecfc00cc3/genes-12-01738-g001.jpg

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