INSERM U722, Faculté de Médecine, Université de Paris, Site Xavier Bichat, 75018 Paris, France.
Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, 2629 HZ Delft, The Netherlands.
Molecules. 2021 Nov 17;26(22):6930. doi: 10.3390/molecules26226930.
Microbes are routinely engineered to synthesize high-value chemicals from renewable materials through synthetic biology and metabolic engineering. Microbial biosynthesis often relies on expression of heterologous biosynthetic pathways, i.e., enzymes transplanted from foreign organisms. Metallocluster enzymes are one of the most ubiquitous family of enzymes involved in natural product biosynthesis and are of great biotechnological importance. However, the functional expression of recombinant metallocluster enzymes in live cells is often challenging and represents a major bottleneck. The activity of metallocluster enzymes requires essential supporting pathways, involved in protein maturation, electron supply, and/or enzyme stability. Proper function of these supporting pathways involves specific protein-protein interactions that remain poorly characterized and are often overlooked by traditional synthetic biology approaches. Consequently, engineering approaches that focus on enzymatic expression and carbon flux alone often overlook the particular needs of metallocluster enzymes. This review highlights the biotechnological relevance of metallocluster enzymes and discusses novel synthetic biology strategies to advance their industrial application, with a particular focus on iron-sulfur cluster enzymes. Strategies to enable functional heterologous expression and enhance recombinant metallocluster enzyme activity in industrial hosts include: (1) optimizing specific maturation pathways; (2) improving catalytic stability; and (3) enhancing electron transfer. In addition, we suggest future directions for developing microbial cell factories that rely on metallocluster enzyme catalysis.
微生物通常通过合成生物学和代谢工程被设计用来从可再生材料中合成高价值的化学品。微生物生物合成通常依赖于异源生物合成途径的表达,即从外源生物移植的酶。金属簇酶是参与天然产物生物合成的最普遍的酶家族之一,具有重要的生物技术意义。然而,重组金属簇酶在活细胞中的功能表达常常具有挑战性,是一个主要的瓶颈。金属簇酶的活性需要必要的支持途径,包括蛋白质成熟、电子供应和/或酶稳定性。这些支持途径的适当功能涉及特定的蛋白质-蛋白质相互作用,这些相互作用仍然描述不足,并且经常被传统的合成生物学方法所忽视。因此,仅关注酶表达和碳通量的工程方法往往会忽略金属簇酶的特殊需求。本综述强调了金属簇酶的生物技术相关性,并讨论了新型合成生物学策略来推进其工业应用,特别是针对铁硫簇酶。实现功能性异源表达和提高工业宿主中重组金属簇酶活性的策略包括:(1)优化特定的成熟途径;(2)提高催化稳定性;和(3)增强电子转移。此外,我们还为开发依赖金属簇酶催化的微生物细胞工厂提出了未来的发展方向。