Ceniceros Ana, Cuervo Lorena, Méndez Carmen, Salas José A, Olano Carlos, Malmierca Mónica G
Departamento de Biología Funcional, Universidad de Oviedo, Avda. Julián Clavería s/n, 33006 Oviedo (Principado de Asturias), Spain.
Instituto Universitario de Oncología del Principado de Asturias (I.U.O.P.A.), Edificio Santiago Gascón, Despacho 2.15-Campus El Cristo B, Universidad de Oviedo, 33006 Oviedo (Principado de Asturias), Spain.
Microorganisms. 2021 Oct 26;9(11):2225. doi: 10.3390/microorganisms9112225.
The rapid emergence of bacterial resistance to antibiotics has urged the need to find novel bioactive compounds against resistant microorganisms. For that purpose, different strategies are being followed, one of them being exploring secondary metabolite production in microorganisms from uncommon sources. In this work, we have analyzed the genome of 12 sp. strains of the CS collection isolated from the surface of leaf-cutting ants of the tribe and compared them to four model species and sp. Ae150A_Ps1, which shares the ecological niche with those of the CS collection. We used a combination of phylogenetics, bioinformatics and dereplication analysis to study the biosynthetic potential of our strains. 51.5% of the biosynthetic gene clusters (BGCs) predicted by antiSMASH were unknown and over half of them were strain-specific, making this strain collection an interesting source of putative novel compounds.
细菌对抗生素的耐药性迅速出现,促使人们需要寻找针对耐药微生物的新型生物活性化合物。为此,人们正在采用不同的策略,其中之一是探索来自不常见来源的微生物中次级代谢产物的产生。在这项工作中,我们分析了从切叶蚁属部落的切叶蚁表面分离的CS菌株库中的12个菌株的基因组,并将它们与四个模式物种以及与CS菌株库具有相同生态位的Ae150A_Ps1菌株进行了比较。我们结合系统发育学、生物信息学和去重复分析来研究我们菌株的生物合成潜力。antiSMASH预测的生物合成基因簇(BGC)中有51.5%是未知的,其中超过一半是菌株特异性的,这使得这个菌株库成为推定新型化合物的一个有趣来源。