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遗传性视网膜疾病:基因、致病变异与相关治疗方式的关联。

Inherited retinal diseases: Linking genes, disease-causing variants, and relevant therapeutic modalities.

机构信息

Department of Ophthalmology, Hadassah Medical Center, Faculty of Medicine, The Hebrew University of Jerusalem, 91120, Israel.

The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat Gan, 5290002, Israel.

出版信息

Prog Retin Eye Res. 2022 Jul;89:101029. doi: 10.1016/j.preteyeres.2021.101029. Epub 2021 Nov 25.

Abstract

Inherited retinal diseases (IRDs) are a clinically complex and heterogenous group of visual impairment phenotypes caused by pathogenic variants in at least 277 nuclear and mitochondrial genes, affecting different retinal regions, and depleting the vision of affected individuals. Genes that cause IRDs when mutated are unique by possessing differing genotype-phenotype correlations, varying inheritance patterns, hypomorphic alleles, and modifier genes thus complicating genetic interpretation. Next-generation sequencing has greatly advanced the identification of novel IRD-related genes and pathogenic variants in the last decade. For this review, we performed an in-depth literature search which allowed for compilation of the Global Retinal Inherited Disease (GRID) dataset containing 4,798 discrete variants and 17,299 alleles published in 31 papers, showing a wide range of frequencies and complexities among the 194 genes reported in GRID, with 65% of pathogenic variants being unique to a single individual. A better understanding of IRD-related gene distribution, gene complexity, and variant types allow for improved genetic testing and therapies. Current genetic therapeutic methods are also quite diverse and rely on variant identification, and range from whole gene replacement to single nucleotide editing at the DNA or RNA levels. IRDs and their suitable therapies thus require a range of effective disease modelling in human cells, granting insight into disease mechanisms and testing of possible treatments. This review summarizes genetic and therapeutic modalities of IRDs, provides new analyses of IRD-related genes (GRID and complexity scores), and provides information to match genetic-based therapies such as gene-specific and variant-specific therapies to the appropriate individuals.

摘要

遗传性视网膜疾病(IRDs)是一组临床表现复杂且具有异质性的视觉障碍表型,由至少 277 个核基因和线粒体基因中的致病性变异引起,影响不同的视网膜区域,导致受影响个体的视力下降。当基因突变时,导致 IRDs 的基因具有独特的基因型-表型相关性、不同的遗传模式、低功能等位基因和修饰基因,从而使遗传解释变得复杂。在过去的十年中,下一代测序技术极大地推动了新的 IRD 相关基因和致病性变异的发现。在这篇综述中,我们进行了深入的文献检索,汇总了包含 31 篇论文中发表的 4798 个离散变异和 17299 个等位基因的全球视网膜遗传性疾病(GRID)数据集,展示了在 GRID 中报告的 194 个基因中存在广泛的频率和复杂性,其中 65%的致病性变异是个体独有的。更好地了解 IRD 相关基因的分布、基因的复杂性和变异类型,有助于改进遗传检测和治疗方法。目前的遗传治疗方法也多种多样,依赖于变异的识别,从全基因替换到 DNA 或 RNA 水平的单个核苷酸编辑。因此,IRDs 及其合适的治疗方法需要在人类细胞中进行一系列有效的疾病建模,深入了解疾病机制并测试可能的治疗方法。本综述总结了 IRDs 的遗传和治疗方式,对 IRD 相关基因(GRID 和复杂性评分)进行了新的分析,并提供信息,将基于基因的治疗方法(如基因特异性和变异特异性治疗)与合适的个体相匹配。

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