Department of Integrated Traditional Chinese and Western Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Center for Stem Cell Research and Application, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Pathol Oncol Res. 2021 Nov 10;27:1609967. doi: 10.3389/pore.2021.1609967. eCollection 2021.
SLC13A4 is a sodium sulfate co-transporter, which is expressed in brains, placentas, thymes and other tissues, plays an essential role in maintaining the metabolic balance of sulfate . The TCGA database shows that it is differentially expressed in a variety of tumors, but its prognostic value in tumors has not been clarified. TCGA, Oncomine and Timer databases were used to analyze SLC13A4 mRNA expression in cancer tissues and normal tissues, and its correlation with clinical prognosis in head and neck tumor. The CIBERSORT database was used to analyze the correlation between SLC13A4 expression and the infiltration of immune cells. SLC13A4 enrichment analysis was carried out by GSEA. SLC13A4 mRNA levels were significantly lower in head and neck tumors than in paracancer tissues. SLC13A4 expression in Head and neck squamous cell carcinoma (HNSCC) was closely related to tumor pathological grade and clinical stage. Decreased SLC13A4 expression was associated with poor overall survival (OS), progression free survival (PFS), disease specific survival (DSS) and recurrence free survival (RFS) in HNSCC patients. The expression of SLC13A4 was negatively correlated with Monocytes, M1 macrophages, M2 macrophages, resting CD4+ memory T cells, resting NK cells and activated NK cells, but positively correlated with neutrophils, plasma cells, T follicular helper cells, gamma delta T cells, regulatory T cells and naive B cells. In addition, the genes in SLC13A4 low-expression group were mainly concentrated in immunity-related activities, viral diseases, typical tumor pathways and metabolism. The SLC13A4 high expression group was mainly enriched in metabolic pathways. These suggest that SLC13A4 may be a potential prognostic biomarker in HNSC and correlated with immune infiltrates.
SLC13A4 是一种硫酸钠共转运蛋白,在大脑、胎盘、胸腺和其他组织中表达,在维持硫酸盐代谢平衡方面发挥着重要作用。TCGA 数据库显示,它在多种肿瘤中差异表达,但在肿瘤中的预后价值尚未阐明。本研究利用 TCGA、Oncomine 和 Timer 数据库分析 SLC13A4 在肿瘤组织和正常组织中的 mRNA 表达,及其与头颈部肿瘤临床预后的关系。利用 CIBERSORT 数据库分析 SLC13A4 表达与免疫细胞浸润的相关性。通过 GSEA 进行 SLC13A4 富集分析。结果发现,与癌旁组织相比,头颈部肿瘤中 SLC13A4mRNA 水平显著降低。SLC13A4 在头颈部鳞状细胞癌(HNSCC)中的表达与肿瘤病理分级和临床分期密切相关。SLC13A4 表达降低与 HNSCC 患者总生存期(OS)、无进展生存期(PFS)、疾病特异性生存期(DSS)和无复发生存期(RFS)不良相关。SLC13A4 的表达与单核细胞、M1 巨噬细胞、M2 巨噬细胞、静止 CD4+记忆 T 细胞、静止自然杀伤细胞和活化自然杀伤细胞呈负相关,与中性粒细胞、浆细胞、滤泡辅助 T 细胞、γδT 细胞、调节性 T 细胞和幼稚 B 细胞呈正相关。此外,SLC13A4 低表达组的基因主要集中在免疫相关活动、病毒疾病、典型肿瘤途径和代谢中。SLC13A4 高表达组主要富集在代谢途径中。这些提示 SLC13A4 可能是 HNSC 的一个潜在预后生物标志物,与免疫浸润相关。