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VectorBase.org 更新:用于人类病原体和相关生物的无脊椎动物载体的生物信息学资源。

VectorBase.org updates: bioinformatic resources for invertebrate vectors of human pathogens and related organisms.

机构信息

Department of Biological Sciences, Eck Institute for Global Health, University Notre Dame, Notre Dame, IN 46556, USA; Dept. Ciencias Biológicas & Dept. Ciencias Básicas Médicas, Universidad Icesi, Calle 18 No 122-135, Cali, Colombia.

Department of Biology, University of Pennsylvania, Philadelphia 19104, PA, USA.

出版信息

Curr Opin Insect Sci. 2022 Apr;50:100860. doi: 10.1016/j.cois.2021.11.008. Epub 2021 Dec 3.

Abstract

VectorBase (VectorBase.org) is part of the VEuPathDB Bioinformatics Resource Center, providing free online access to multi-omics and population biology data, focusing on arthropod vectors and invertebrates of importance to human health. VectorBase includes genomics and functional genomics data from bed bugs, biting midges, body lice, kissing bugs, mites, mosquitoes, sand flies, ticks, tsetse flies, stable flies, house flies, fruit flies, and a snail intermediate host. Tools include the Search Strategy system and MapVEu, enabling users to interrogate and visualize diverse 'omics and population-level data using a graphical interface (no programming experience required). Users can also analyze their own private data, such as transcriptomic sequences, exploring their results in the context of other publicly-available information in the database. Help Desk: help@vectorbase.org.

摘要

VectorBase(VectorBase.org)是 VEuPathDB 生物信息学资源中心的一部分,提供免费在线访问多组学和群体生物学数据的服务,重点关注节肢动物载体和对人类健康重要的无脊椎动物。VectorBase 包含了臭虫、吸血蠓、体虱、接吻虫、螨虫、蚊子、沙蝇、蜱虫、采采蝇、厩螫蝇、家蝇、果蝇和一个蜗牛中间宿主的基因组学和功能基因组学数据。该工具包括 Search Strategy 系统和 MapVEu,使用户能够使用图形界面查询和可视化各种“组学”和群体水平的数据(无需编程经验)。用户还可以分析他们自己的私人数据,如转录组序列,并在数据库中其他公开可用信息的背景下探索他们的结果。帮助台:help@vectorbase.org

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/12a3/9133010/4c8d7d8fd088/nihms-1761746-f0001.jpg

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