Nazir Amina, Ali Azam, Qing Hong, Tong Yigang
Key Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Sciences, Beijing Institute of Technology, Beijing, People's Republic of China.
Beijing Advanced Innovation Center for Soft Matter Science and Engineering, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, People's Republic of China.
Infect Drug Resist. 2021 Nov 30;14:5041-5055. doi: 10.2147/IDR.S330560. eCollection 2021.
The bacteriophages have been explored at a huge scale as a model system for their applications in many biological-related fields. Jumbo phages with a large genome size from 200 to 500 kbp were not previously assigned a great value, and characterized by complex structures coupled with large virions with a wide variety of hosts. The origin of most of the jumbo phages was not well understood; however, many other prominent features have been discovered recently. In the current review, we strive to unearth the most advanced characteristics of jumbo phages, particularly their significance and structural organization that holds immense value to the viral life cycle. The unique characteristics of jumbo phages are the basis of variations in different types of phages concerning their organization at the genomic level, virion structure, evolution, and progeny propagation. The presence of tRNA and additional translation-related genes along with chaperonin genes mark the ability of these phages for being independent of host molecular machinery enabling them to have wide host options. A large number of jumbo phages have been isolated from various sources through advanced standard screening methods. The current review has summarized the available data on jumbo phages and discussed the genome orientation of jumbo phages, translational machinery, diversity and evolution of jumbo phages. In the studies conducted, jumbo phages possessed special additional genes that helps to reduce the dependence of jumbo phages on their hosts. Furthermore, their genomes might have evolved from smaller genome phages.
噬菌体作为一种模型系统,已在许多与生物学相关的领域中得到大规模探索,以用于各种应用。以前,基因组大小在200至500 kbp之间的巨型噬菌体并未被赋予很高的价值,其特征是结构复杂,病毒体大,宿主种类繁多。大多数巨型噬菌体的起源尚不清楚;然而,最近发现了许多其他显著特征。在当前的综述中,我们努力挖掘巨型噬菌体最先进的特征,特别是它们对病毒生命周期具有巨大价值的意义和结构组织。巨型噬菌体的独特特征是不同类型噬菌体在基因组水平、病毒体结构、进化和子代繁殖方面存在差异的基础。tRNA、额外的翻译相关基因以及伴侣蛋白基因的存在标志着这些噬菌体能够独立于宿主分子机制,从而使它们具有广泛的宿主选择。通过先进的标准筛选方法,已从各种来源分离出大量巨型噬菌体。当前的综述总结了有关巨型噬菌体的现有数据,并讨论了巨型噬菌体的基因组方向、翻译机制、多样性和进化。在已进行的研究中,巨型噬菌体拥有特殊的额外基因,有助于降低巨型噬菌体对宿主的依赖性。此外,它们的基因组可能是从小基因组噬菌体进化而来的。