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蝎子的高级系统发育与分类、分类学混乱以及在线出版中的同行评审标准。

Scorpion higher phylogeny and classification, taxonomic anarchy, and standards for peer review in online publishing.

作者信息

Prendini Lorenzo, Wheeler Ward C

机构信息

Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024-5192, USA.

出版信息

Cladistics. 2005 Oct;21(5):446-494. doi: 10.1111/j.1096-0031.2005.00073.x.

Abstract

Soleglad and Fet's (2003a) attempt to reconstruct the phylogeny of Recent (including extant) scorpions, the revised classification derived from it, and recent emendations, mostly published in their self-edited online journal, Euscorpius, are deficient. Separate analyses of three independent matrices (morphology, 16S rDNA, 18S rDNA) were presented. In the morphological matrix, 52 binary and 10 tristate trichobothrial characters were replaced with one character comprising six ordered states representing trichobothrial "types". The remaining matrix of 105 characters was further reduced to 33 "fundamental" characters (20% of the morphological dataset), the analysis of which appears to be the basis for the revised classification presented. The taxon sample for the morphological analysis included 14 supraspecific terminal taxa representing genera, the monophyly of only 7 (12.5%) of which has been confirmed. A composite terminal, assembled from the fragments of fossils that may not be confamilial let alone monophyletic, was created for the Palaeopisthacanthidae, employed as the primary outgroup for the analysis. Other important outgroup taxa, notably eurypterids, xiphosurans and other arachnids, were omitted entirely. The morphological characters presented contained numerous unjustifiable assumptions of character polarity and phylogenetic relationship. An approach to character coding, deliberately adopted to reduce "homoplasy", biased the analysis towards a preconceived result. Structurally and topographically similar features in different taxa were explicitly assigned separate (often autapomorphic) states according to presumed phylogenetic relationships among the taxa in which they were observed. Putative "reversals" were coded as separate characters or states. Character transformation was forced by ordering, additive coding or Sankoff optimization through allegedly intermediate states for which there is no empirical evidence. Many characters were defined in a manner that demonstrates either a lack of understanding of, or disregard for, established methods and standards of morphological character coding. Some states display overlapping variation whereas others subsume variation that is not structurally or topographically similar. Polymorphic "states" were created for terminals with interspecific variation and unknown "states" for terminals that should have been scored unknown. Many characters were not evaluated for particular terminal taxa, but merely scored inapplicable although the structures and, consequently, the characters in question are present and therefore applicable to them. In view of the significant theoretical and empirical problems with the approach to cladistics taken by Soleglad and Fet, we find no justification for accepting either the results of their analyses or the revised classification derived from them. Pending the outcome of a rigorous phylogenetic analysis, published according to acceptable standards of scholarship in a peer-reviewed journal, we revert to the suprageneric classification of Scorpiones reflected by the most recent peer-reviewed, published treatments and reject all changes to the classification proposed by Soleglad, Fet and colleagues since 2001. We argue that an analysis and revised classification of the kind presented in various papers by these authors could not survive the peer-review process of a mainstream scientific journal. The poor scholarship exemplified by these and other papers published in Euscorpius emphasize the importance of quality control associated with the emergent infrastructure of online publishing. A centralized register of taxa may be the only solution for ensuring quality control in the taxonomy of the future.

摘要

索莱格拉德和费特(2003a)尝试重建现生(包括现存)蝎子的系统发育,以及由此得出的修订分类和近期修订内容,这些大多发表在他们自行编辑的在线期刊《真蝎》上,存在缺陷。文中给出了对三个独立矩阵(形态学、16S rDNA、18S rDNA)的单独分析。在形态学矩阵中,52个二元和10个三态的栉器特征被替换为一个包含六个有序状态的特征,代表栉器“类型”。剩余的105个特征的矩阵进一步缩减为33个“基本”特征(形态学数据集的20%),对其的分析似乎是所呈现的修订分类的基础。形态学分析的分类单元样本包括14个代表属的超特定终端分类单元,其中只有7个(12.5%)的单系性得到了确认。为古原棘蝎科创建了一个由可能并非同科更不用说单系的化石碎片组装而成的复合终端,用作分析的主要外类群。其他重要的外类群分类单元,特别是广翅鲎、剑尾蝎和其他蛛形纲动物,被完全省略。所呈现的形态学特征包含了许多关于特征极性和系统发育关系的不合理假设。一种故意采用以减少“同塑性”的特征编码方法,使分析偏向于一个先入为主的结果。根据在其中观察到这些特征的分类单元之间假定的系统发育关系,不同分类单元中结构和地形相似的特征被明确赋予单独的(通常是自近裔性状的)状态。假定的“逆转”被编码为单独的特征或状态。通过排序、加法编码或桑科夫优化,通过据称没有经验证据的中间状态来强制特征转换。许多特征的定义方式表明对既定的形态学特征编码方法缺乏理解或漠视。一些状态显示出重叠的变异,而另一些状态则包含了结构或地形上不相似的变异。为具有种间变异的终端创建了多态“状态”,为本应标记为未知的终端创建了未知“状态”。许多特征没有针对特定的终端分类单元进行评估,而仅仅标记为不适用,尽管相关结构以及因此相关的特征是存在的,所以适用于它们。鉴于索莱格拉德和费特采用的分支分类方法存在重大的理论和实证问题,我们认为没有理由接受他们的分析结果或由此得出的修订分类。在根据学术认可的标准在同行评审期刊上发表严格的系统发育分析结果之前,我们恢复到最近同行评审发表的论述所反映的蝎目的超属分类,并拒绝自2001年以来索莱格拉德、费特及其同事提议的所有分类变化。我们认为这些作者在各种论文中呈现的那种分析和修订分类无法通过主流科学期刊的同行评审过程。这些以及发表在《真蝎》上的其他论文所体现的糟糕学术水平,强调了与新兴的在线出版基础设施相关的质量控制的重要性。一个集中的分类单元登记册可能是确保未来分类学质量控制的唯一解决方案。

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