细菌糖的化学报告者:发展与应用。

Chemical Reporters for Bacterial Glycans: Development and Applications.

机构信息

Department of Chemistry and Biochemistry, Central Michigan University, Mount Pleasant, Michigan 48859, United States.

Biochemistry, Cell, and Molecular Biology Program, Central Michigan University, Mount Pleasant, Michigan 48859, United States.

出版信息

Chem Rev. 2022 Feb 9;122(3):3336-3413. doi: 10.1021/acs.chemrev.1c00729. Epub 2021 Dec 14.

Abstract

Bacteria possess an extraordinary repertoire of cell envelope glycans that have critical physiological functions. Pathogenic bacteria have glycans that are essential for growth and virulence but are absent from humans, making them high-priority targets for antibiotic, vaccine, and diagnostic development. The advent of metabolic labeling with bioorthogonal chemical reporters and small-molecule fluorescent reporters has enabled the investigation and targeting of specific bacterial glycans in their native environments. These tools have opened the door to imaging glycan dynamics, assaying and inhibiting glycan biosynthesis, profiling glycoproteins and glycan-binding proteins, and targeting pathogens with diagnostic and therapeutic payload. These capabilities have been wielded in diverse commensal and pathogenic Gram-positive, Gram-negative, and mycobacterial species─including within live host organisms. Here, we review the development and applications of chemical reporters for bacterial glycans, including peptidoglycan, lipopolysaccharide, glycoproteins, teichoic acids, and capsular polysaccharides, as well as mycobacterial glycans, including trehalose glycolipids and arabinan-containing glycoconjugates. We cover in detail how bacteria-targeting chemical reporters are designed, synthesized, and evaluated, how they operate from a mechanistic standpoint, and how this information informs their judicious and innovative application. We also provide a perspective on the current state and future directions of the field, underscoring the need for interdisciplinary teams to create novel tools and extend existing tools to support fundamental and translational research on bacterial glycans.

摘要

细菌拥有一套非凡的细胞包膜聚糖库,这些聚糖具有关键的生理功能。致病菌拥有的聚糖对于生长和毒力至关重要,但在人类中却不存在,这使它们成为抗生素、疫苗和诊断试剂开发的高优先级目标。生物正交化学报告物和小分子荧光报告物的代谢标记的出现,使得在其天然环境中研究和靶向特定细菌聚糖成为可能。这些工具为研究聚糖动态、检测和抑制聚糖生物合成、分析糖蛋白和聚糖结合蛋白、以及用诊断和治疗有效载荷靶向病原体打开了大门。这些功能已在多种共生和致病的革兰氏阳性、革兰氏阴性和分枝杆菌物种中得到应用,包括在活宿主生物体中。在这里,我们回顾了用于细菌聚糖的化学报告物的开发和应用,包括肽聚糖、脂多糖、糖蛋白、磷壁酸和荚膜多糖,以及分枝杆菌聚糖,包括海藻糖糖脂和含有阿拉伯聚糖的糖缀合物。我们详细介绍了如何设计、合成和评估靶向细菌的化学报告物,从机制角度介绍它们的工作原理,以及这些信息如何为它们的明智和创新应用提供信息。我们还对该领域的现状和未来方向提供了一个视角,强调需要跨学科团队来创建新工具,并将现有工具扩展到支持细菌聚糖的基础和转化研究。

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