（葫芦科）完整叶绿体基因组序列的特征分析
Characterization of the complete chloroplast genome sequence of (Cucurbitaceae).
作者信息
Zhang Xiao, Chen Xiaodan, Zhang Hao, Zhao Yuemei, Ju Miaomiao, Zhao Guifang
机构信息
Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Northwest University, Xi'an, China.
College of Life Sciences, Sun Yat-sen University, Guangzhou, China.
出版信息
Mitochondrial DNA B Resour. 2021 Dec 10;7(1):32-34. doi: 10.1080/23802359.2021.2007811. eCollection 2022.
C. Y. Wu et S. K. Chen is an endemic creeping herbaceous species mainly distributed in dense forests on limestone in northwestern China. Here, the complete chloroplast genome sequence of was obtained by Illumina pair-end sequencing. The circular complete chloroplast genome of is 158,692 bp in length and contains a large single copy region (87,452 bp), a small single copy region (19,068 bp) and two short inverted repeat regions (26,086 bp). The genome sequence encodes 133 genes including 87 protein-coding genes, 37 transfer RNA genes, 8 ribosomal RNA genes and 1 pseudogene. The maximum likelihood (ML) phylogeny estimation shows that is sister to all other analyzed species of the genus with high bootstrap support.
吴CY和陈SK是一种地方性匍匐草本物种，主要分布在中国西北部石灰岩地区的茂密森林中。在此，通过Illumina双端测序获得了其完整的叶绿体基因组序列。其环状完整叶绿体基因组长度为158,692 bp，包含一个大单拷贝区域（87,452 bp）、一个小单拷贝区域（19,068 bp）和两个短反向重复区域（26,086 bp）。该基因组序列编码133个基因，包括87个蛋白质编码基因、37个转运RNA基因、8个核糖体RNA基因和1个假基因。最大似然（ML）系统发育估计表明，它在高自展支持下是该属所有其他分析物种的姐妹种。
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