• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于药效团的虚拟筛选以鉴定新型β-肾上腺素能受体激动剂

Pharmacophore-guided Virtual Screening to Identify New β -adrenergic Receptor Agonists.

作者信息

Ujiantari Navista Sri Octa, Ham Seungmin, Nagiri Chisae, Shihoya Wataru, Nureki Osamu, Hutchinson Dana Sabine, Schuster Daniela

机构信息

Institute of Pharmacy/Pharmaceutical Chemistry, University of Innsbruck, Innsbruck, 6020, Austria.

Faculty of Pharmacy, Universitas Gadjah Mada, Yogyakarta, 55281, Indonesia.

出版信息

Mol Inform. 2022 Jul;41(7):e2100223. doi: 10.1002/minf.202100223. Epub 2022 Feb 2.

DOI:10.1002/minf.202100223
PMID:34963040
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9400856/
Abstract

The β -adrenergic receptor (β -AR) is found in several tissues such as adipose tissue and urinary bladder. It is a therapeutic target because it plays a role in thermogenesis, lipolysis, and bladder relaxation. Two β -AR agonists are used clinically: mirabegron 1 and vibegron 2, which are indicated for overactive bladder syndrome. However, these drugs show adverse effects, including increased blood pressure in mirabegron patients. Hence, new β -AR agonists are needed as starting points for drug development. Previous pharmacophore modeling studies of the β -AR did not involve experimental in vitro validation. Therefore, this study aimed to conduct prospective virtual screening and confirm the biological activity of virtual hits. Ligand-based pharmacophore modeling was performed since no 3D structure of human β -AR is yet available. A dataset consisting of β -AR agonists was prepared to build and validate the pharmacophore models. The best model was employed for prospective virtual screening, followed by physicochemical property filtering and a docking evaluation. To confirm the activity of the virtual hits, an in vitro assay was conducted, measuring cAMP levels at the cloned β -AR. Out of 35 tested compounds, 4 compounds were active in CHO-K1 cells expressing the human β -AR, and 8 compounds were active in CHO-K1 cells expressing the mouse β -AR.

摘要

β-肾上腺素能受体(β-AR)存在于多种组织中,如脂肪组织和膀胱。它是一个治疗靶点,因为它在产热、脂肪分解和膀胱舒张中发挥作用。临床上使用两种β-AR激动剂:米拉贝隆1和维贝隆2,它们被用于治疗膀胱过度活动症。然而,这些药物会产生不良反应,包括米拉贝隆患者血压升高。因此,需要新的β-AR激动剂作为药物开发的起点。先前关于β-AR的药效团建模研究未涉及体外实验验证。因此,本研究旨在进行前瞻性虚拟筛选并确认虚拟命中物的生物活性。由于尚无人类β-AR的三维结构,因此进行了基于配体的药效团建模。准备了一个由β-AR激动剂组成的数据集来构建和验证药效团模型。最佳模型用于前瞻性虚拟筛选,随后进行物理化学性质筛选和对接评估。为了确认虚拟命中物的活性,进行了体外试验,测量克隆的β-AR处的环磷酸腺苷(cAMP)水平。在35种测试化合物中,4种化合物在表达人类β-AR的CHO-K1细胞中有活性,8种化合物在表达小鼠β-AR的CHO-K1细胞中有活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/3f2e86a69a34/MINF-41-2100223-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/6aa5ab502014/MINF-41-2100223-g015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/d8f0aa8652fe/MINF-41-2100223-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/eba87f3fb6d9/MINF-41-2100223-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/69a426f276b8/MINF-41-2100223-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/5500e5afe30f/MINF-41-2100223-g021.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/e34c0cfd6eb1/MINF-41-2100223-g028.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/8b89c8b7badf/MINF-41-2100223-g020.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/3f2e86a69a34/MINF-41-2100223-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/6aa5ab502014/MINF-41-2100223-g015.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/d8f0aa8652fe/MINF-41-2100223-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/eba87f3fb6d9/MINF-41-2100223-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/69a426f276b8/MINF-41-2100223-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/5500e5afe30f/MINF-41-2100223-g021.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/e34c0cfd6eb1/MINF-41-2100223-g028.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/8b89c8b7badf/MINF-41-2100223-g020.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d648/9400856/3f2e86a69a34/MINF-41-2100223-g004.jpg

相似文献

1
Pharmacophore-guided Virtual Screening to Identify New β -adrenergic Receptor Agonists.基于药效团的虚拟筛选以鉴定新型β-肾上腺素能受体激动剂
Mol Inform. 2022 Jul;41(7):e2100223. doi: 10.1002/minf.202100223. Epub 2022 Feb 2.
2
Vibegron shows high selectivity and potent agonist activity for β3-adrenoceptors, irrespective of receptor density.维贝格隆对β3-肾上腺素受体表现出高选择性和强效激动剂活性,而与受体密度无关。
PLoS One. 2023 Sep 1;18(9):e0290685. doi: 10.1371/journal.pone.0290685. eCollection 2023.
3
GW427353 (solabegron), a novel, selective beta3-adrenergic receptor agonist, evokes bladder relaxation and increases micturition reflex threshold in the dog.GW427353(索拉贝隆)是一种新型的选择性β3肾上腺素能受体激动剂,可引起犬膀胱舒张并提高其排尿反射阈值。
J Pharmacol Exp Ther. 2007 Oct;323(1):202-9. doi: 10.1124/jpet.107.125757. Epub 2007 Jul 12.
4
Selective activation of beta3-adrenoceptors by octopamine: comparative studies in mammalian fat cells.章鱼胺对β3-肾上腺素能受体的选择性激活:在哺乳动物脂肪细胞中的比较研究。
Naunyn Schmiedebergs Arch Pharmacol. 1999 Apr;359(4):310-21. doi: 10.1007/pl00005357.
5
Anti-obesity and anti-diabetic activities of a new beta3 adrenergic receptor agonist, (S)-(Z)-[4-[[1-[2-[(2-hydroxy-3-phenoxypropyl)]amino]ethyl]-1-propenyl] phenoxy] acetic acid ethanedioic acid (SWR-0342SA), in KK-Ay mice.新型β3肾上腺素能受体激动剂(S)-(Z)-[4-[[1-[2-[(2-羟基-3-苯氧基丙基)]氨基]乙基]-1-丙烯基]苯氧基]乙酸乙二酸(SWR-0342SA)对KK-Ay小鼠的抗肥胖和抗糖尿病活性
Biol Pharm Bull. 1999 Oct;22(10):1073-8. doi: 10.1248/bpb.22.1073.
6
Characterization of beta3-adrenergic receptor: determination of pharmacophore and 3D QSAR model for beta3 adrenergic receptor agonism.β3肾上腺素能受体的表征:β3肾上腺素能受体激动作用的药效团确定及三维定量构效关系模型
J Comput Aided Mol Des. 2005 Feb;19(2):93-110. doi: 10.1007/s10822-005-1558-7.
7
Characterization of β-adrenergic receptors in bovine intramuscular and subcutaneous adipose tissue: comparison of lubabegron fumarate with β-adrenergic receptor agonists and antagonists.牛肌肉内和皮下脂肪组织中β-肾上腺素受体的特性:富马酸芦卡贝隆与β-肾上腺素受体激动剂和拮抗剂的比较。
J Anim Sci. 2021 Aug 1;99(8). doi: 10.1093/jas/skab116.
8
Effects of beta3-adrenergic receptor activation on rat urinary bladder hyperactivity induced by ovariectomy.β3-肾上腺素能受体激活对去卵巢诱导的大鼠膀胱功能亢进的影响。
J Pharmacol Exp Ther. 2009 Sep;330(3):704-17. doi: 10.1124/jpet.109.155010. Epub 2009 Jun 10.
9
Identification of novel β3-adrenoceptor agonists using energetic analysis, structure based pharmacophores and virtual screening.利用能量分析、基于结构的药效团和虚拟筛选鉴定新型β3肾上腺素能受体激动剂。
Comb Chem High Throughput Screen. 2012 Sep;15(8):623-40. doi: 10.2174/138620712802650559.
10
Regulation of Human Adipose Tissue Activation, Gallbladder Size, and Bile Acid Metabolism by a β3-Adrenergic Receptor Agonist.β3 肾上腺素能受体激动剂对人脂肪组织激活、胆囊大小和胆汁酸代谢的调节作用。
Diabetes. 2018 Oct;67(10):2113-2125. doi: 10.2337/db18-0462. Epub 2018 Jul 6.

引用本文的文献

1
Artificial Intelligence: A New Tool for Structure-Based G Protein-Coupled Receptor Drug Discovery.人工智能:基于结构的G蛋白偶联受体药物发现的新工具。
Biomolecules. 2025 Mar 17;15(3):423. doi: 10.3390/biom15030423.
2
A fruitful century for the scalable synthesis and reactions of biphenyl derivatives: applications and biological aspects.联苯衍生物可扩展合成与反应的丰硕百年:应用及生物学方面
RSC Adv. 2023 Jun 16;13(27):18262-18305. doi: 10.1039/d3ra03531j. eCollection 2023 Jun 15.
3
Mind the Gap-Deciphering GPCR Pharmacology Using 3D Pharmacophores and Artificial Intelligence.

本文引用的文献

1
Cryo-EM structure of the β3-adrenergic receptor reveals the molecular basis of subtype selectivity.β3-肾上腺素受体的冷冻电镜结构揭示了亚型选择性的分子基础。
Mol Cell. 2021 Aug 5;81(15):3205-3215.e5. doi: 10.1016/j.molcel.2021.06.024. Epub 2021 Jul 26.
2
New drug approvals for 2020: Synthesis and clinical applications.2020 年新药批准:合成与临床应用。
Eur J Med Chem. 2021 Apr 5;215:113284. doi: 10.1016/j.ejmech.2021.113284. Epub 2021 Feb 12.
3
ProMod3-A versatile homology modelling toolbox.ProMod3——一个通用的同源建模工具包。
关注差距——利用三维药效团和人工智能解析GPCR药理学
Pharmaceuticals (Basel). 2022 Oct 22;15(11):1304. doi: 10.3390/ph15111304.
PLoS Comput Biol. 2021 Jan 28;17(1):e1008667. doi: 10.1371/journal.pcbi.1008667. eCollection 2021 Jan.
4
Once-Daily Vibegron 75 mg for Overactive Bladder: Long-Term Safety and Efficacy from a Double-Blind Extension Study of the International Phase 3 Trial (EMPOWUR).每日一次 vibegron 75mg 治疗膀胱过度活动症:国际 3 期试验(EMPOWUR)双盲扩展研究的长期安全性和疗效。
J Urol. 2021 May;205(5):1421-1429. doi: 10.1097/JU.0000000000001574. Epub 2020 Dec 28.
5
PubChem in 2021: new data content and improved web interfaces.PubChem 在 2021 年:新增数据内容和改进的网络界面。
Nucleic Acids Res. 2021 Jan 8;49(D1):D1388-D1395. doi: 10.1093/nar/gkaa971.
6
Ten quick tips for homology modeling of high-resolution protein 3D structures.高分辨率蛋白质 3D 结构同源建模的十个快速技巧。
PLoS Comput Biol. 2020 Apr 2;16(4):e1007449. doi: 10.1371/journal.pcbi.1007449. eCollection 2020 Apr.
7
THE CONCISE GUIDE TO PHARMACOLOGY 2019/20: G protein-coupled receptors.2019/20 年药理学简明指南:G 蛋白偶联受体。
Br J Pharmacol. 2019 Dec;176 Suppl 1(Suppl 1):S21-S141. doi: 10.1111/bph.14748.
8
Adrenoceptors-New roles for old players.肾上腺素能受体:旧将新用
Br J Pharmacol. 2019 Jul;176(14):2339-2342. doi: 10.1111/bph.14701.
9
Everything You Always Wanted to Know about β-AR * (* But Were Afraid to Ask).关于β-AR 的一切,你一直想知道(*但又不敢问)。
Cells. 2019 Apr 16;8(4):357. doi: 10.3390/cells8040357.
10
Adrenoceptors in white, brown, and brite adipocytes.白色、棕色和米色脂肪细胞中的肾上腺素能受体。
Br J Pharmacol. 2019 Jul;176(14):2416-2432. doi: 10.1111/bph.14631. Epub 2019 Apr 7.