Sajid Mohammad, Srivastava Sonal, Kumar Amit, Kumar Anuj, Singh Harpreet, Bharadwaj Mausumi
Division of Molecular Genetics and Biochemistry, Molecular Biology Group, ICMR-National Institute of Cancer Prevention and Research, Noida, India.
ICMR-AIIMS Computational Genomics Centre, Division of Biomedical Informatics, Indian Council of Medical Research (ICMR), New Delhi, India.
Front Microbiol. 2021 Dec 24;12:784841. doi: 10.3389/fmicb.2021.784841. eCollection 2021.
Smokeless tobacco products (STPs) carry assorted microbial population that contributes to carcinogens synthesis like tobacco-specific nitrosamines (TSNAs). Extensive exploration of microbiota-harboring STPs is required to understand their full carcinogenic potential. Here, we applied 16S rRNA gene sequencing to investigate bacteriome present in moist STPs immensely consumed in India (, and ). Further, the functional metagenome was speculated by PICRUSt (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States) to assign the abundance of genes related to nitrogen metabolism, bacterial toxins, antibiotic drug resistance and other pro-inflammatory molecules. Highly diverse bacterial communities were observed in all moist STPs. Taxonomic analysis revealed a total of 549 genera belonging to four major phyla , , and . Overall, the core bacterial genera , , , , , , , and were significantly abundant in moist STPs. Elevated moisture-holding products like and harbor rich bacterial species diversity and showed similar bacteriome composition. Furthermore, products showed the highest level of genes associated with nitrogen metabolism, antibiotic resistance, toxins, and pro-inflammation (predicted by PICRUSt) which can contribute to the synthesis of TSNAs and induction of oral cancer. The present broad investigation of moist STPs-associated bacteriome prevalence and their detailed metabolic potential will provide novel insight into the oral carcinogenesis induced by STPs.
无烟烟草制品(STPs)携带各种各样的微生物群落,这些微生物有助于合成致癌物,如烟草特异性亚硝胺(TSNAs)。需要对含有微生物群的无烟烟草制品进行广泛研究,以了解它们的全部致癌潜力。在这里,我们应用16S rRNA基因测序来研究印度大量消费的湿无烟烟草制品( 、 和 )中存在的细菌群落。此外,通过PICRUSt(通过重建未观察状态对群落进行系统发育研究)推测功能宏基因组,以确定与氮代谢、细菌毒素、抗生素耐药性和其他促炎分子相关的基因丰度。在所有湿无烟烟草制品中都观察到高度多样的细菌群落。分类分析显示共有549个属,属于四个主要门 、 、 和 。总体而言,核心细菌属 、 、 、 、 、 、 和 在湿无烟烟草制品中显著丰富。像 和 这样保水能力增强的产品拥有丰富的细菌物种多样性,并显示出相似的细菌群落组成。此外, 产品显示出与氮代谢、抗生素耐药性、毒素和促炎相关的基因水平最高(由PICRUSt预测),这可能有助于TSNAs的合成和口腔癌的诱导。目前对湿无烟烟草制品相关细菌群落流行率及其详细代谢潜力的广泛研究将为无烟烟草制品诱导的口腔致癌作用提供新的见解。