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使用 16S rDNA 分析健康印度成年无烟气溶胶使用者口腔细菌组成特征。

Characterization of Oral Bacterial Composition of Adult Smokeless Tobacco Users from Healthy Indians Using 16S rDNA Analysis.

机构信息

Department of Microbiology, Babasaheb Bhimrao Ambedkar University, Lucknow, India.

Department of Bio-Statistics and Data Management, ICMR-National Institute of Occupational Health, Ahmedabad, India.

出版信息

Microb Ecol. 2021 Nov;82(4):1061-1073. doi: 10.1007/s00248-021-01711-0. Epub 2021 Feb 26.

Abstract

The present investigation is aiming to report the oral bacterial composition of smokeless tobacco (SLT) users and to determine the influence of SLT products on the healthy Indian population. With the aid of the V3 hypervariable region of the 16S rRNA gene, a total of 8,080,889 high-quality reads were clustered into 15 phyla and 180 genera in the oral cavity of the SLT users. Comparative analysis revealed a more diverse microbiome where two phyla and sixteen genera were significantly different among the SLT users as compared to the control group (p-value < 0.05). The prevalence of Fusobacteria-, Porphyromonas-, Desulfobulbus-, Enterococcus-, and Parvimonas-like genera among SLT users indicates altered bacterial communities among SLT users. Besides, the depletion of health-compatible bacteria such as Lactobacillus and Haemophilus also suggests poor oral health. Here, the majority of the altered genera belong to Gram-negative anaerobes that have been reported for assisting biofilm formation that leads in the progression of several oral diseases. The PICRUSt analysis further supports the hypothesis where a significant increase in the count of the genes involved in the metabolism of nitrogen, amino acids, and nicotinate/nicotinamide was observed among tobacco chewers. Moreover, this study has a high significance in Indian prospects where the SLT consumers are prevalent but we are deficient in information on their oral microbiome.

摘要

本研究旨在报告咀嚼无烟烟草(SLT)人群的口腔细菌组成,并确定 SLT 产品对健康印度人群的影响。通过 16S rRNA 基因 V3 高变区,共获得 8080889 条高质量的读数,在 SLT 用户的口腔中聚类为 15 个门和 180 个属。比较分析显示,SLT 用户的微生物组更为多样,其中有两个门和十六个属与对照组相比有显著差异(p 值 < 0.05)。梭杆菌属、卟啉单胞菌属、脱硫弧菌属、肠球菌属和 Parvimonas 样属在 SLT 用户中的流行表明 SLT 用户的细菌群落发生了改变。此外,乳酸杆菌和嗜血杆菌等健康相容细菌的减少也表明口腔健康状况不佳。在这里,大多数改变的属属于革兰氏阴性厌氧菌,这些菌已被报道有助于生物膜的形成,从而导致多种口腔疾病的进展。PICRUSt 分析进一步支持了这样一种假设,即参与氮、氨基酸和烟酸/烟酰胺代谢的基因的计数在咀嚼者中显著增加。此外,这项研究在印度具有重要意义,因为 SLT 消费者很普遍,但我们对他们的口腔微生物组知之甚少。

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