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利用重组和荧光 FAST 标记的醋酸杆菌属木糖亚种菌株从 H + CO 中进行自养乳酸生产。

Autotrophic lactate production from H + CO using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains.

机构信息

Institute of Microbiology and Biotechnology, University of Ulm, Albert-Einstein-Allee 11, 89081, Ulm, Germany.

Clostridia Research Group, BBSRC/EPSRC Synthetic Biology Research Centre (SBRC), University of Nottingham, Nottingham, UK.

出版信息

Appl Microbiol Biotechnol. 2022 Feb;106(4):1447-1458. doi: 10.1007/s00253-022-11770-z. Epub 2022 Jan 29.

Abstract

Lactate has various uses as industrial platform chemical, poly-lactic acid precursor or feedstock for anaerobic co-cultivations. The aim of this study was to construct and characterise Acetobacterium woodii strains capable of autotrophic lactate production. Therefore, the lctBCD genes, encoding the native Lct dehydrogenase complex, responsible for lactate consumption, were knocked out. Subsequently, a gene encoding a D-lactate dehydrogenase (LDHD) originating from Leuconostoc mesenteroides was expressed in A. woodii, either under the control of the anhydrotetracycline-inducible promoter P or under the lactose-inducible promoter P. Moreover, LDHD was N-terminally fused to the oxygen-independent fluorescence-activating and absorption-shifting tag (FAST) and expressed in respective A. woodii strains. Cells that produced the LDHD fusion protein were capable of lactate production of up to 18.8 mM in autotrophic batch experiments using H + CO as energy and carbon source. Furthermore, cells showed a clear and bright fluorescence during exponential growth, as well as in the stationary phase after induction, mediated by the N-terminal FAST. Flow cytometry at the single-cell level revealed phenotypic heterogeneities for cells expressing the FAST-tagged LDHD fusion protein. This study shows that FAST provides a new reporter tool to quickly analyze gene expression over the course of growth experiments of A. woodii. Consequently, fluorescence-based reporters allow for faster and more targeted optimization of production strains.Key points •Autotrophic lactate production was achieved with A. woodii. •FAST functions as fluorescent marker protein in A. woodii. •Fluorescence measurements on single-cell level revealed population heterogeneity.

摘要

乳酸在工业平台化学品、聚乳酸前体或厌氧共培养物的原料方面有多种用途。本研究的目的是构建和表征能够进行自养乳酸生产的木质醋酸杆菌菌株。因此,敲除了编码负责乳酸消耗的天然 Lct 脱氢酶复合物的 lctBCD 基因。随后,在木质醋酸杆菌中表达了来自肠膜明串珠菌的 D-乳酸脱氢酶(LDHD)基因,该基因分别受 anhydrotetracycline 诱导型启动子 P 或乳糖诱导型启动子 P 的控制。此外,LDHD 的 N 端与氧独立的荧光激活和吸收移位标签(FAST)融合,并在相应的木质醋酸杆菌菌株中表达。产生 LDHD 融合蛋白的细胞能够在使用 H + CO 作为能量和碳源的自养批式实验中生产高达 18.8 mM 的乳酸。此外,在诱导后的指数生长期和静止期,通过 N 端 FAST,细胞表现出明显而明亮的荧光。基于流式细胞术的单细胞水平分析表明,表达 FAST 标记的 LDHD 融合蛋白的细胞存在表型异质性。本研究表明,FAST 为快速分析木质醋酸杆菌生长实验过程中的基因表达提供了一种新的报告工具。因此,荧光报告基因允许更快、更有针对性地优化生产菌株。关键点 • 木质醋酸杆菌实现了自养乳酸生产。 • FAST 在木质醋酸杆菌中作为荧光标记蛋白发挥作用。 • 单细胞水平的荧光测量揭示了群体异质性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/751b/8882112/7a30da2fcb4f/253_2022_11770_Fig1_HTML.jpg

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