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大肠杆菌中基因功能与基因定位之间的关系。

Relationship between gene function and gene location in Escherichia coli.

作者信息

Riley M, Solomon L, Zipkas D

出版信息

J Mol Evol. 1978 May 12;11(1):47-56. doi: 10.1007/BF01768024.

DOI:10.1007/BF01768024
PMID:351197
Abstract

Genes of Escherichia coli were grouped according to the "biochemical relatedness" of the enzymes they specifiy, using two schemes to determine relatedness: similarity of reaction or similarity of reactants. The tendency of biochemically related genes as so defined to lie approximately 90 degrees or 180 degrees from one another on the circular genetic map was analyzed statistically. Of the classes analyzed, only the genes for the enzymes of glucose catabolism showed a significant departure from random distribution in this respect. The glucose catabolism genes showed a pronounced tendency to lie either 90 degrees of 180 degrees from one another (P = ca. 10(-9)), and, furthermore, most of these genes were found to lie in only four gene clusters on the E. coli genome. The significance of this observation is discussed in relation to evolutionary mechanisms and to mechanisms of gene expression.

摘要

根据大肠杆菌基因所指定的酶的“生化相关性”对其进行分组,使用两种方案来确定相关性:反应相似性或反应物相似性。对如此定义的生化相关基因在环状遗传图谱上彼此相距约90度或180度的趋势进行了统计分析。在所分析的类别中,就这方面而言,只有葡萄糖分解代谢酶的基因显示出与随机分布有显著差异。葡萄糖分解代谢基因表现出明显的彼此相距90度或180度的趋势(P约为10^(-9)),此外,这些基因中的大多数被发现在大肠杆菌基因组中仅位于四个基因簇中。结合进化机制和基因表达机制对这一观察结果的意义进行了讨论。

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本文引用的文献

1
Genetic mapping of aro, pyr, and pur markers in Klebsiella pneumoniae.
Jpn J Microbiol. 1971 Jan;15(1):11-20.
2
Genetic analysis and genome structure in Streptomyces coelicolor.天蓝色链霉菌的遗传分析与基因组结构
Bacteriol Rev. 1967 Dec;31(4):373-403. doi: 10.1128/br.31.4.373-403.1967.
3
Transposition of the Lac region of E. coli.大肠杆菌Lac区域的转位
Cold Spring Harb Symp Quant Biol. 1966;31:393-401. doi: 10.1101/sqb.1966.031.01.051.
EMBO J. 1983;2(1):39-44. doi: 10.1002/j.1460-2075.1983.tb01377.x.
4
Detection of fundamental principles and a level of order for large-scale gene clustering on the Escherichia coli chromosome.大肠杆菌染色体上大规模基因聚类的基本原理及有序程度的检测
J Mol Evol. 1993 Apr;36(4):347-60. doi: 10.1007/BF00182182.
5
Identification and chromosomal distribution of DNA sequence segments conserved since divergence of Escherichia coli and Bacillus subtilis.自大肠杆菌和枯草芽孢杆菌分化以来保守的DNA序列片段的鉴定及染色体分布
J Mol Evol. 1995 Jun;40(6):585-93. doi: 10.1007/BF00160505.
6
Functions of the gene products of Escherichia coli.大肠杆菌基因产物的功能。
Microbiol Rev. 1993 Dec;57(4):862-952. doi: 10.1128/mr.57.4.862-952.1993.
7
The density distribution of gene loci over the genetic map of Escherichia coli: its structural, functional and evolutionary implications.基因位点在大肠杆菌遗传图谱上的密度分布:其结构、功能及进化意义
J Mol Evol. 1981;17(6):354-60. doi: 10.1007/BF01734357.
8
Linkage map of Escherichia coli K-12, edition 6.大肠杆菌K-12连锁图谱,第6版。
Microbiol Rev. 1980 Mar;44(1):1-56. doi: 10.1128/mr.44.1.1-56.1980.
9
Clustering of mutations affecting central pathway enzymes of carbohydrate catabolism in Pseudomonas aeruginosa.铜绿假单胞菌中影响碳水化合物分解代谢中心途径酶的突变聚类
J Bacteriol. 1983 Dec;156(3):1123-9. doi: 10.1128/jb.156.3.1123-1129.1983.
10
Gene encoding the sigma 37 species of RNA polymerase sigma factor from Bacillus subtilis.编码来自枯草芽孢杆菌的RNA聚合酶σ因子的σ37种类的基因。
Proc Natl Acad Sci U S A. 1986 Aug;83(16):5943-7. doi: 10.1073/pnas.83.16.5943.
4
The clustering on the Pseudomonas putida chromosome of genes specifying dissimilatory functions.恶臭假单胞菌染色体上指定异化功能的基因聚类。
J Mol Evol. 1973 Nov 27;2(4):235-42. doi: 10.1007/BF01654092.
5
Linkage map of Escherichia coli strain K-12.大肠杆菌K-12菌株的连锁图谱。
Bacteriol Rev. 1972 Dec;36(4):504-24. doi: 10.1128/br.36.4.504-524.1972.
6
Supra-operonic clustering of genes specifying glucose dissimilation in Pseudomonas putida.恶臭假单胞菌中指定葡萄糖异化的基因的操纵子上游聚类。
Mol Gen Genet. 1976 Mar 30;144(3):307-11. doi: 10.1007/BF00341729.
7
Evolution of genome size by DNA doublings.通过DNA加倍实现基因组大小的进化。
Science. 1976 May 7;192(4239):524-9. doi: 10.1126/science.1257789.
8
Proposal concerning mechanism of evolution of the genome of Escherichia coli.关于大肠杆菌基因组进化机制的提议。
Proc Natl Acad Sci U S A. 1975 Apr;72(4):1354-8. doi: 10.1073/pnas.72.4.1354.
9
Genetic relatedness in the family Enterobacteriaceae.肠杆菌科家族中的遗传相关性。
Annu Rev Microbiol. 1976;30:327-49. doi: 10.1146/annurev.mi.30.100176.001551.
10
Glyceraldehyde 3-p dehydrogenase, glycerate 3-P kinase and enolase mutants of Escherichia coli: genetic studies.
Mol Gen Genet. 1976 Apr 23;145(1):65-71. doi: 10.1007/BF00331559.