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蟋蟀的基因组学和基因组编辑技术,一种新兴的生物学和食品科学模式昆虫。

Genomics and genome editing techniques of crickets, an emerging model insect for biology and food science.

机构信息

Division of Evolutionary Developmental Biology, National Institute for Basic Biology, Okazaki, Japan; Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Japan.

Department of Organismic and Evolutionary Biology, Harvard University, Cambridge MA, USA; Laboratory of Bioinformatics and Genome Biology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland.

出版信息

Curr Opin Insect Sci. 2022 Apr;50:100881. doi: 10.1016/j.cois.2022.100881. Epub 2022 Feb 2.

Abstract

Most tools available for manipulating gene function in insects have been developed for holometabolous species. In contrast, functional genetics tools for the Hemimetabola are highly underdeveloped. This is a barrier both to understanding ancestral insect biology, and to optimizing contemporary study and manipulation of particular large hemimetabolous orders of crucial economic and agricultural importance like the Orthoptera. For orthopteran insects, including crickets, the rapid spread of next-generation sequencing technology has made transcriptome data available for a wide variety of species over the past decade. Furthermore, whole genome sequences of orthopteran insects with relatively large genome sizes are now available. With these new genome assemblies and the development of genome editing technologies such as the CRISPR-Cas9 system, it has become possible to create gene knock-out and knock-in strains in orthopteran insects. As a result, orthopteran species should become increasingly feasible for laboratory study not only in research fields that have traditionally used insects, but also in agricultural fields that use them as food and feed. In this review, we summarize these recent advances and their relevance to such applications.

摘要

大多数可用于操纵昆虫基因功能的工具都是为完全变态物种开发的。相比之下,半变态昆虫的功能遗传学工具则极不发达。这不仅阻碍了对昆虫祖先生物学的理解,也阻碍了对具有重要经济和农业重要性的特定大型半变态目昆虫(如直翅目)的当代研究和操作的优化。对于直翅目昆虫,包括蟋蟀,在过去十年中,下一代测序技术的快速传播使得各种物种的转录组数据都可用。此外,相对较大基因组大小的直翅目昆虫的全基因组序列现在也可用。随着这些新的基因组组装和基因组编辑技术(如 CRISPR-Cas9 系统)的发展,已经可以在直翅目昆虫中创建基因敲除和敲入品系。因此,直翅目物种不仅在传统上使用昆虫的研究领域,而且在将它们用作食物和饲料的农业领域,越来越适合实验室研究。在这篇综述中,我们总结了这些最新进展及其与这些应用的相关性。

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