Guan Yongjun, Li Man, Qiu Zhendong, Xu Junhui, Zhang Yichao, Hu Ning, Zhang Xuanzhe, Guo Wenyi, Yuan Jingping, Shi Qiao, Wang Weixing
Department of General Surgery, Renmin Hospital of Wuhan University, Wuhan 430060, China.
Department of Pathology, Renmin Hospital of Wuhan University, Wuhan 430060, China.
J Adv Res. 2021 Jun 12;36:73-87. doi: 10.1016/j.jare.2021.06.008. eCollection 2022 Feb.
is a new type of regulatory protein family that participates in the regulation of tumor cell growth. However, most of the studies are conducted in cell lines, and systematic studies have not been conducted in human tumors.
We conducted a comprehensive analysis of based on its expression profile and its relationship with patient survival, immune infiltration, tumor microenvironment, and drug sensitivity.
We used the TCGA database to analyze the correlation between family gene expression and prognosis and clinical stage. The protein expression of in tumor tissues was analyzed by immunohistochemistry. Use the cBioPortal database to analyze the alteration frequency in family genes in human tumors. In addition, we used ESTIMATE algorithm and TIMER website to analyze the correlation between family genes and tumor immunity. Finally, we further analyzed the relationship between family genes and tumor stemness and the sensitivity of cancer cells to chemotherapy.
We conducted a comprehensive analysis of family genes based on its expression profile and its relationship with patient survival. We also confirmed this conclusion by immunohistochemistry. The expression of family genes is related to OS, clinical stage, tumor mutation, methylation, CNV, and SNV. family genes are significantly associated with poor prognosis of UVM. has obvious correlation with tumor immunity. K2 can increase the sensitivity of chemotherapy drugs, while reduces the sensitivity of multiple chemotherapy drugs. In addition, the expression level of family genes is significantly correlated with the activity of cancer marker-related pathways.
plays a role of tumor suppressor gene or tumor-promoting gene in different tumors. However, family genes play a role in promoting cancer in UVM. family genes are significantly associated with drug sensitivity.
是一种新型调节蛋白家族,参与肿瘤细胞生长的调控。然而,大多数研究是在细胞系中进行的,尚未在人类肿瘤中进行系统研究。
我们基于其表达谱及其与患者生存、免疫浸润、肿瘤微环境和药物敏感性的关系,对进行了全面分析。
我们使用TCGA数据库分析家族基因表达与预后及临床分期之间的相关性。通过免疫组织化学分析肿瘤组织中的蛋白表达。使用cBioPortal数据库分析人类肿瘤中家族基因的改变频率。此外,我们使用ESTIMATE算法和TIMER网站分析家族基因与肿瘤免疫之间的相关性。最后,我们进一步分析了家族基因与肿瘤干性以及癌细胞对化疗敏感性之间的关系。
我们基于其表达谱及其与患者生存的关系,对家族基因进行了全面分析。我们还通过免疫组织化学证实了这一结论。家族基因的表达与总生存期、临床分期、肿瘤突变、甲基化、拷贝数变异和单核苷酸变异有关。家族基因与葡萄膜黑色素瘤的不良预后显著相关。与肿瘤免疫有明显相关性。K2可增加化疗药物的敏感性,而降低多种化疗药物的敏感性。此外,家族基因的表达水平与癌症标志物相关通路的活性显著相关。
在不同肿瘤中发挥肿瘤抑制基因或促肿瘤基因的作用。然而,家族基因在葡萄膜黑色素瘤中发挥促癌作用。家族基因与药物敏感性显著相关。