Tan Chang, Qin Geng, Wang Qian-Qian, Li Kai-Min, Zhou Yuan-Chen, Yao Shu-Kun
Graduate School, Peking University China-Japan Friendship School of Clinical Medicine, Beijing 100029, China.
Department of Gastroenterology, China-Japan Friendship Hospital, Beijing 100029, China.
World J Gastrointest Oncol. 2024 Jul 15;16(7):2971-2987. doi: 10.4251/wjgo.v16.i7.2971.
The majority of colorectal cancer (CRC) cases develop from precursor advanced adenoma (AA). With the development of proteomics technologies, blood protein biomarkers have potential applications in the early screening of AA and CRC in the general population.
To identify serum protein biomarkers for the early screening of AA and CRC.
We collected 43 serum samples from 8 normal controls (NCs), 19 AA patients and 16 CRC patients at China-Japan Friendship Hospital. Quantitative proteomic analysis was performed using liquid chromatography-mass spectrometry/mass spectrometry and data independent acquisition, and differentially expressed proteins (DEPs) with -values < 0.05 and absolute fold changes > 1.5 were screened out, followed by bioinformatics analysis. Prognosis was further analyzed based on public databases, and proteins expression in tissues were validated by immunohistochemistry.
A total of 2132 proteins and 17365 peptides were identified in the serum samples. There were 459 upregulated proteins and 118 downregulated proteins in the NC AA group, 289 and 180 in the NC CRC group, and 52 and 248 in the AA CRC group, respectively. Bioinformatic analysis revealed that these DEPs had different functions and participated in extensive signaling pathways. We also identified DIAPH1, VASP, RAB11B, LBP, SAR1A, TUBGCP5, and DOK3 as important proteins for the progression of AA and CRC. Furthermore, VASP ( < 0.01), LBP ( = 0.01), TUBGCP5 ( < 0.01), and DOK3 ( < 0.01) were associated with a poor prognosis. In addition, we propose that LBP and VASP may be more promising protein biomarkers for the early screening of colorectal tumors.
Our study elucidated the serum proteomic profiles of AA and CRC patients, and the identified proteins, such as LBP and VASP, may contribute to the early detection of AA and CRC.
大多数结直肠癌(CRC)病例由前驱进展性腺瘤(AA)发展而来。随着蛋白质组学技术的发展,血液蛋白质生物标志物在普通人群中AA和CRC的早期筛查中具有潜在应用价值。
鉴定用于AA和CRC早期筛查的血清蛋白质生物标志物。
我们在中国-日本友好医院收集了8名正常对照(NC)、19名AA患者和16名CRC患者的43份血清样本。使用液相色谱-质谱/质谱和数据非依赖采集进行定量蛋白质组分析,筛选出P值<0.05且绝对变化倍数>1.5的差异表达蛋白(DEP),随后进行生物信息学分析。基于公共数据库进一步分析预后,并通过免疫组织化学验证组织中的蛋白质表达。
在血清样本中共鉴定出2132种蛋白质和17365种肽段。NC与AA组中有459种上调蛋白和118种下调蛋白,NC与CRC组中有289种和180种,AA与CRC组中有52种和248种。生物信息学分析表明,这些DEP具有不同功能并参与广泛的信号通路。我们还鉴定出DIAPH1、VASP、RAB11B、LBP、SAR1A、TUBGCP5和DOK3是AA和CRC进展的重要蛋白质。此外,VASP(P<0.01)、LBP(P = 0.01)、TUBGCP5(P<0.01)和DOK3(P<0.01)与预后不良相关。此外,我们提出LBP和VASP可能是结直肠肿瘤早期筛查更有前景的蛋白质生物标志物。
我们的研究阐明了AA和CRC患者的血清蛋白质组图谱,鉴定出的蛋白质,如LBP和VASP,可能有助于AA和CRC的早期检测。