Wang Chen, Liu Ao-Lei, Wu He-Zhen, Yang Yan-Fang
Hubei University of Chinese Medicine, Wuhan, 430065, China.
Key Laboratory of Traditional Chinese Medicine Resources and Chemistry of Hubei Province, Wuhan, 430065, China.
Nat Prod Commun. 2022 Feb 2;17(2):1934578X221075075. doi: 10.1177/1934578X221075075. eCollection 2022 Feb.
To predict the mechanism of Shengmai Injection (SMI) in the acute treatment of COVID-19 by network pharmacology and molecular docking. Search the compounds in the Traditional Chinese Medicine Systems Pharmacology (TCMSP), and screen them by Drug-like properties (DL) and Oral bioavailability (OB); Using PharmMapper database and GeneCards database to collect compounds targets and COVID-19 targets, and using UniProt database to standardize the names of target genes; Using DAVID database for KEGG pathway annotation and GO bioinformatics analysis; Using Cytoscape 3.8.2 software and STRING 10.5 database to construct "Component-Target-Pathway" network and Protein-Protein Interaction network (PPI); Using molecular docking to predict the binding ability of key compounds and key proteins. A total of 34 active components, 38 core targets and 180 signaling pathways were screened out. The results of molecular docking showed that Schisantherin A and Moupinamide have strong binding with EGFR and MAPK1. The key active compounds of SMI in the treatment of COVID-19 may be Schisantherin A and Moupinamide, and the molecular mechanism may be related to key targets such as EGFR and MAPK1, and may be involved in the PI3K-Akt signaling pathway and MAPK signaling pathway.
运用网络药理学和分子对接技术预测生脉注射液(SMI)在急性治疗新型冠状病毒肺炎(COVID-19)中的作用机制。在中国中药系统药理学数据库(TCMSP)中检索化合物,并通过类药性质(DL)和口服生物利用度(OB)进行筛选;利用中药系统药理学数据库与分析平台(PharmMapper)数据库和基因卡片(GeneCards)数据库收集化合物靶点和COVID-19靶点,并利用通用蛋白质数据库(UniProt)对靶基因名称进行标准化;利用DAVID数据库进行京都基因与基因组百科全书(KEGG)通路注释和基因本体(GO)生物信息学分析;利用Cytoscape 3.8.2软件和搜索工具检索相互作用基因/蛋白质的数据库(STRING)10.5数据库构建“成分-靶点-通路”网络和蛋白质-蛋白质相互作用(PPI)网络;利用分子对接预测关键化合物与关键蛋白的结合能力。共筛选出34种活性成分、38个核心靶点和180条信号通路。分子对接结果显示,五味子酯甲和穆坪酰胺与表皮生长因子受体(EGFR)和丝裂原活化蛋白激酶1(MAPK1)具有较强的结合能力。生脉注射液治疗COVID-19的关键活性化合物可能是五味子酯甲和穆坪酰胺,其分子机制可能与EGFR和MAPK1等关键靶点有关,可能涉及磷脂酰肌醇-3激酶/蛋白激酶B(PI3K-Akt)信号通路和MAPK信号通路。