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比较脾脏的蛋白质组学分析揭示了不同生长阶段牦牛(Bos grunniens)中的关键免疫相关蛋白。

Comparative proteomic analysis of spleen reveals key immune-related proteins in the yak (Bos grunniens) at different growth stages.

机构信息

Key Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Ministry of Education and Sichuan Province, Southwest Minzu University, Chengdu 610041, China.

Sichuan Academy of Grassland Sciences, Chengdu 611731, China.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2022 Jun;42:100968. doi: 10.1016/j.cbd.2022.100968. Epub 2022 Jan 31.

Abstract

Spleen plays an indispensable role in the immune system as the largest lymphatic organ in the body. The spleens of yaks at three developmental stages (1 day fetal yak, 15 months juvenile yak and 5 years old adult yak) were sampled and the Tandem mass tag (TMT) quantification method was employed in spleen proteomic analysis. The results showed that 6576 proteins and 529 differentially expressed proteins (DEPs) were identified in the yak spleens at three growth stages. Gene ontology (GO) analysis of DEPs indicated that DEPs were enriched in Oxygen transport, Actin filament movement, DNA replication, Cell cycle process, and Cell macromolecule biosynthesis process, which was conducive to high altitude breathing, protein synthesis and organ growth in yaks. These were indispensable for yak spleen growth and cell metabolism, high altitude adaptation. Those DEPs were further analyzed based on Kyoto encyclopedia of genes and genomes (KEGG) pathways, which principally participated in Th1 and Th2 cell differentiation, NF-kappa B signaling pathway, Phagosome, and Glutathione metabolism. Those pathways were associated with some animal life activities in defense against microbial antigens, indicating that with age, the immune function of the yak's spleen continued to increase. Hemoglobin, Tumor necrosis factor receptor associated factor 1 (TRAF1), T cell receptor (TCR), Macrophage receptor, Fc receptors (FcR), and Gamma-glutamyl transferase (GGT) of DEPs played roles in immune function in yak spleen directly or indirectly. The dynamic changes of Toll like receptor 2 (TLR2), TRAF1 and Heat shock protein 27 (HSP27 or HSPB1) detected by Immunohistochemistry were consistent with those obtained from TMT proteomic. In conclusion, this study provides extensive and functional analyses of the spleen proteome at three developmental stages and will offer a new insight into key proteins involved in the immune function of yak spleen.

摘要

脾脏作为体内最大的淋巴器官,在免疫系统中起着不可或缺的作用。采集了三个发育阶段(1 天胎牛、15 月龄犊牛和 5 岁成年牛)的牦牛脾脏组织,采用串联质量标签(TMT)定量方法进行脾脏蛋白质组分析。结果表明,在三个生长阶段的牦牛脾脏中鉴定到 6576 种蛋白质和 529 种差异表达蛋白(DEPs)。DEPs 的基因本体(GO)分析表明,DEPs 富集于氧气运输、肌动蛋白丝运动、DNA 复制、细胞周期过程和细胞大分子生物合成过程,这有利于牦牛的高空呼吸、蛋白质合成和器官生长。这些对于牦牛脾脏的生长和细胞代谢、高原适应是必不可少的。基于京都基因与基因组百科全书(KEGG)通路对这些 DEPs 进行了进一步分析,主要参与了 Th1 和 Th2 细胞分化、NF-kappa B 信号通路、吞噬体和谷胱甘肽代谢。这些通路与一些动物的生命活动有关,如防御微生物抗原,表明随着年龄的增长,牦牛脾脏的免疫功能不断增强。DEPs 中的血红蛋白、肿瘤坏死因子受体相关因子 1(TRAF1)、T 细胞受体(TCR)、巨噬细胞受体、Fc 受体(FcR)和γ-谷氨酰转移酶(GGT)直接或间接参与了牦牛脾脏的免疫功能。免疫组织化学检测到的 Toll 样受体 2(TLR2)、TRAF1 和热休克蛋白 27(HSP27 或 HSPB1)的动态变化与 TMT 蛋白质组学获得的结果一致。综上所述,本研究对三个发育阶段的脾脏蛋白质组进行了广泛而深入的功能分析,为研究牦牛脾脏免疫功能的关键蛋白提供了新的视角。

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